AMCG00004294 (dtnb,LOC108412184,LOC106603664)


Basic Information

Item Value
gene id AMCG00004294
gene name dtnb,LOC108412184,LOC106603664
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 41705110 ~ 41730436 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004294
ATCACTAGGTTGCAGAACAGCCTGGATATGCCTAATCGAATGGCTGATGAACATGCTTTGATAGCAGCATATGTGAATCAGCTACAGAATGGCACACGCAGTGTACTTGACAGCCCCAGTCGACTGGACGAGGAGCACCGTCTCATCGCCAGGTATGCGGCCCGCCTGGCAGCAGAAGCTGGCAATGCCACTCAACGCCCTCCAACTGACTTGGGGTTCAATTTTGATGCCAACAAGCAACAAAGGCAGCTGATTGcagaactggaaaataaaaatagGGAGATCTTGCAGGAGATTCAGCGGCTGAGACTGGAGCATGAGCAGGCGTCCCAGCCCACCCCAGAGAAAGCCCAGCAGAACCCCACGCTCCTCGCCGAGCTGCGGCTGCTCAGGCAGAGGAAGGACGAGCTGGAGCAGCGCATGTCGGCATTGCAGGAGAGCCGGAGAGAGCTGATGGTGCAGCTGGAGGGACTGATGAAGCTGCTGAAGGCCCAGGCAGCCAGCTCCCCCCATTCCTCACCCAGTCACGGTGCCAGTCGTCCGATGCCCATGCCCGTCAGGTCAACATCTGCCGGATCCACCCCCACCCATGTACCTCAGGACTCCCTGGCAGGGGTTGGGGGTGATGTGCAAGAAGCTTTTGCCCAAGGTGCTCGCAGAAATCTTCGCAATGATCTGCTAGTGGCAGCTGATTCAATTACAAACACTATGTCATCACTGGTCAAAGAGCTTCATTCAGTAGATGAAGGTggtgaagaagaagaggagaagaTGCAGAATGGAAAAGACAGGGGCACAGTGACTGTAAAAAGCAACCAATCACTCTGCAGACACACCCTCATCCTTGTGGACAGGCACACCATTCCATCAACGATGACAggtTTCCTTGTCATTTTAATTGGATCACGAAAT

Function

symbol description
dtnb Predicted to enable DNA binding activity and phosphatase binding activity. Involved in neuron differentiation. Located in cytoplasm and nucleus.

NR:

description
PREDICTED: dystrobrevin beta isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004294 True 912 mRNA 0.54 10 41705110 41730436

Neighbor

gene id symbol gene type direction distance location
AMCG00004293 NA coding upstream 38703 41652615 ~ 41666407 (+)
AMCG00004292 NA coding upstream 104136 41568409 ~ 41600974 (+)
AMCG00004291 NA coding upstream 154141 41543076 ~ 41550969 (+)
AMCG00004289 LOC107593268,LOC107719402,LOC107697206,LOC107721442,LOC107690993 coding upstream 187720 41464947 ~ 41517390 (+)
AMCG00004286 hadha,LOC102787580,LOC102203549,LOC100703423,LOC100304971,LOC106603767,LOC107594700 coding upstream 317487 41376868 ~ 41387623 (+)
AMCG00004295 NA coding downstream 99303 41829739 ~ 41852260 (+)
AMCG00004297 LOC106603656 coding downstream 165815 41896251 ~ 41916088 (+)
AMCG00004296 NA coding downstream 218935 41949371 ~ 41964474 (+)
AMCG00004299 mapre3b,LOC107392001,LOC100704238 coding downstream 280249 42010685 ~ 42024740 (+)
AMCG00004298 LOC104961504,LOC106608390 coding downstream 298941 42029377 ~ 42045091 (+)
G7101 NA non-coding upstream 98351 41605110 ~ 41606759 (+)
G7102 NA non-coding upstream 175802 41523053 ~ 41529308 (+)
G7084 NA non-coding upstream 336632 41367145 ~ 41368478 (+)
G7078 LOC103376870 non-coding upstream 341044 41295298 ~ 41364066 (+)
G7048 NA non-coding upstream 726791 40977999 ~ 40978319 (+)
G7182 NA non-coding downstream 235578 41966014 ~ 41966233 (+)
G7221 NA non-coding downstream 335061 42065497 ~ 42067725 (+)
G7231 NA non-coding downstream 357355 42087791 ~ 42089653 (+)
G7272 sod2,LOC102787761 non-coding downstream 602989 42333425 ~ 42336643 (+)
G7278 NA non-coding downstream 634432 42364868 ~ 42365654 (+)
G7094 NA other upstream 197879 41459576 ~ 41507231 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 1363875 40326410 ~ 40341235 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 3857390 37832623 ~ 37847720 (+)
G6369 NA other upstream 4704952 36999357 ~ 37000158 (+)
G6328 NA other upstream 4813364 36861547 ~ 36891746 (+)
AMCG00004304 NA other downstream 479994 42210430 ~ 42216362 (+)
G7329 fabp7,LOC108247051,LOC104945778 other downstream 958343 42688779 ~ 42691109 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 2887749 44618185 ~ 44640732 (+)
AMCG00004380 NA other downstream 4231574 45962010 ~ 45968306 (+)
G7999 NA other downstream 6416452 48146888 ~ 48147156 (+)

Expression


Co-expression Network