AMCG00004295


Basic Information

Item Value
gene id AMCG00004295
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 41829739 ~ 41852260 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004295
ATGTCAGAGGAAGGAGTGGTGGGGTCGAAGTGTCTGACTAGTGTGGTGGGCCAGTCCTCGGAGCAGGTGCACAATGGAGACGTGGACAGTCATCCTGGGGACTCTATTGCTGCCTCCTCCAAGCAGGACAGGAACGTCCCAGAGAATGGGGTCCCCAGAGAGCCTGTCCGCAAGTCTGAAGAGCTTCCGGATCAGGAGGCCCCAGGGGAAGGATACAGAAAGGGGAGGCAAGGCTCCTCCCTGGAGAATGGCTTCCCGACTTCCCTGGATGACCAGGATTCGGAGAAGGACGGAGAGCACGTGCCTCCCACTCCTCGCAAGAAGCGGGGGAGACGGAAACTGGAGCATCCTGAAAAACatattgaggagaaggaggagagcaGCTGTGAGTCCGTCAAAACCGAGGGAACTCGAGCCAGGCTTCGTGGGGGACTGGGCTGGGAAACCAGCCTACGTCAGAGGCCCATGCAGAGAATTACCTTCCAGGCTGGGGACCCTTATTACATTAGCAAGAGGAAGAGGGATGAGTGGCTGGCCAAATGGAAGATGGAGGTGAGTAAATCGCTCAACACAGTGTTTGAGAGACAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004295 True 591 mRNA 0.57 3 41829739 41852260

Neighbor

gene id symbol gene type direction distance location
AMCG00004294 dtnb,LOC108412184,LOC106603664 coding upstream 99303 41705110 ~ 41730436 (+)
AMCG00004293 NA coding upstream 163332 41652615 ~ 41666407 (+)
AMCG00004292 NA coding upstream 228765 41568409 ~ 41600974 (+)
AMCG00004291 NA coding upstream 278770 41543076 ~ 41550969 (+)
AMCG00004289 LOC107593268,LOC107719402,LOC107697206,LOC107721442,LOC107690993 coding upstream 312349 41464947 ~ 41517390 (+)
AMCG00004297 LOC106603656 coding downstream 43991 41896251 ~ 41916088 (+)
AMCG00004296 NA coding downstream 97111 41949371 ~ 41964474 (+)
AMCG00004299 mapre3b,LOC107392001,LOC100704238 coding downstream 158425 42010685 ~ 42024740 (+)
AMCG00004298 LOC104961504,LOC106608390 coding downstream 177117 42029377 ~ 42045091 (+)
AMCG00004301 NA coding downstream 195383 42047643 ~ 42065411 (+)
G7101 NA non-coding upstream 222980 41605110 ~ 41606759 (+)
G7102 NA non-coding upstream 300431 41523053 ~ 41529308 (+)
G7084 NA non-coding upstream 461261 41367145 ~ 41368478 (+)
G7078 LOC103376870 non-coding upstream 465673 41295298 ~ 41364066 (+)
G7048 NA non-coding upstream 851420 40977999 ~ 40978319 (+)
G7182 NA non-coding downstream 113754 41966014 ~ 41966233 (+)
G7221 NA non-coding downstream 213237 42065497 ~ 42067725 (+)
G7231 NA non-coding downstream 235531 42087791 ~ 42089653 (+)
G7272 sod2,LOC102787761 non-coding downstream 481165 42333425 ~ 42336643 (+)
G7278 NA non-coding downstream 512608 42364868 ~ 42365654 (+)
G7094 NA other upstream 322508 41459576 ~ 41507231 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 1488504 40326410 ~ 40341235 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 3982019 37832623 ~ 37847720 (+)
G6369 NA other upstream 4829581 36999357 ~ 37000158 (+)
G6328 NA other upstream 4937993 36861547 ~ 36891746 (+)
AMCG00004304 NA other downstream 358170 42210430 ~ 42216362 (+)
G7329 fabp7,LOC108247051,LOC104945778 other downstream 836519 42688779 ~ 42691109 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 2765925 44618185 ~ 44640732 (+)
AMCG00004380 NA other downstream 4109750 45962010 ~ 45968306 (+)
G7999 NA other downstream 6294628 48146888 ~ 48147156 (+)

Expression


Co-expression Network