AMCG00004303


Basic Information

Item Value
gene id AMCG00004303
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 42089871 ~ 42098322 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004303
ATGCACGGGCGCGCGCGGGCGGCTCAGCGGTGTCCTAGCAACGCAGATGACAACAGCGCTGCCCGGGCTGCGCGCGCACTCCCGCACGGCTCACTTTCATCCCAAAACCCTCGCCGACCCGGGCTGCGCGCTGTCCGCTTCTCCCACATGAGTCAACTCGCAAACGCCCCAGAGCAACATGAAAGCGGCCCGTCTGTGGAGTCCGACGTCCTGGAGGAGAGGCTCGCCGCCCGCCGCCTGCGCATGGCCGCCCGGGCCGAGGCCAAGAAACGGGAGGCAGTGGGGGACCATGCCCGGGAGAAGCACGATGCAAGGGAGGAGCCGAGGAAGAGCCAGCAGCAGGTGGAGCAGAGCCGCAAGAGGATGACTAAGCTGCAGGCTGATGGCACGGAGCTGGTGACTAACATCCAGGTGGCAGCAGACTGGAGGGAGTCTCGGAGAAGgaccgaggaggaggaggccaaGAGACAGAGGACAGAGAAGCTGGAGAATGAAGCCAAGGCGAGCTTAGAGAAGTTTGAGGAAATTGCCAAGAAATGGACATCCAGCAGAATGAAGGAGATCCCACAGGAGCTGAGGGATGCCCTCAACACCCAGCAGCATCAATGCGCCCTCCTCATTGAGGAAAAGAACAAGGTCATTCATGACCTGCAGCAGGAGCTGAAAGTGAGTGACAACCGCTACGTGAAAGACCTGAAGAAACAAGCAGAAGACATCGACCTCATGATTGAGAGAATGGAGGAACAGATCAAGAATTTGATGAAATCCTACCGAGAAGAGCAGGACCAGATTGAGGTTGAACTTGAATTTTGCTATCCCTTCCTTCTGTCCGTTGTTTTCTTTCACGAATGTGTTGAAGGCTGCCATTGGCCCTCCATGTCTTTCTCATTTTTGGTCATGTTTGCACAGAAAGCCTTTGAAATGGAGCGAAGGGAGCTTCTGGacaacagctttaaaaaatggGAGCAGATGATGCACAATCGTCGAGACAAGGAGCTGGAATATCTGACCCTTAGGATGAAGTCTGTGGAGGAGCAAGaaaagcagctgcagcagctgaGGGTGGAGGATGCGGAGGAGTACAACATGATCAAGATCAAGCTGGAGACAGACGTGCAGTTGctggagcagcagctgcagcagatgaaagccACCTTCCAGCTCAACCAGGAGAAACTGGAGTATAACTTCCAGGTGCTGAAGAAGCGCGACGAGGAAAACACAATCACCAAGTCCCAGCAGAAGAGGAGAATCACCAGGCTGCAGGATGTTCTGAACAACCTGAGGATCAAACTTGCCAAGCAGGAGAAGCAGTCGTGGGAGGACAACCGGTCCCTGACGGATGACTATGAGAGGATCATGCAGCAGTACACGGACACGCAGAGGAAGATGAGGCAATTTGCTGCCGTTGATGCAAAGACGTTCGAGGAGATGTGGCTGATGAATGAGGCGGAGGTGAAGGAGCTGGTGGAGAAGGCGCTGGAGACTGACAGGCTCATTCATGAGCAACAGCTGGGCCTGGCCTGGATGCGGCCCCCGCTGCCCTTCACGGCGCGCTCTGGACCTGTCCTGCCGCAGCGCAGCACCAAGAGGCCGGCTGCACAGCTGGCGGGGGAGCTGCTGCTGAGAGGGAGCGAGGCTGGTGAGGAAAAAGTCAGAGGTTCTGGCCCGGCAGCACTAGTCTCCCCAGGCAGCGAGCCCCCTGCCCCGGACCAGGAAGCATTAGACAGCGGACCCCTGCAGGGTCCTTCTGAGGAGCATGTGCCGATCTCTCCCCAGACGGTGAAGAGACTGCTGCAGATCCTGTGTGACGAGGCGGGCTTCTTGATTGAGAGTAAATTACTCACATTACTTTCCCCCTTGGAGAAGGATCAGCAGTCCCTCATGAAGCTGGATGCCATATTCTTGGCCCTGGGGATTGAGAATGAAGACGATGTTTACGCGCTCACAGATTTCTTCATCAAGTACAGAGAGCAGCAGGGAGGAAACACTGAGttttcagCAGAGGACTCGTCCCTGTCACAGAGCGAGGGCAGAGCGGAGAGGCGCAGAGAGGTGTCGGGTATGGCACCTGGAGGAACAGTGTCCGATCTCATTCACCCCAATGACGTCCTGAAGGCACTGCGGGCAGAGAAGCGGCTGTCCAAGGTTCTGAACCTGGAGGACAGAGATGACTCTGAAGACGCTGCCTTCTGGGATGCCATGGCCAGAGTGATTCCAGAGTCCAAGCTCAAGACCTGGGATGCCCTGGAGACGGCCTTGGAGAAGTACTACCACGTCCTGACGGAGCGGGCAGCGCTCATCGATGACACGCAGGGCCTGAAGCAGCAGAACGCAGAGCTCCGCATGCTGCTGCATCAGTATGTCAATTCCAGGGTGAACGCGGAGCTGGAGATCCCCCCCACACAAGTGATGCAGATGCAGCCCCAGGGGAGCTGATGGCCGGAGTGCACAGCCAGGAAactttatattgatttttaattagaaatcaTGTGAGTTCCACTGTTTTGAAAACCTATTCTGTTCCAGTATTTCTTATTAAACGCTCTCAC

Function

GO:

id name namespace
GO:0001539 cilium or flagellum-dependent cell motility biological_process
GO:0005929 cilium cellular_component
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K19754 DRC1; dynein regulatry complex protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004303 True 2552 mRNA 0.56 16 42089871 42098322

Neighbor

gene id symbol gene type direction distance location
AMCG00004300 NA coding upstream 6029 42069528 ~ 42083842 (+)
AMCG00004301 NA coding upstream 24460 42047643 ~ 42065411 (+)
AMCG00004298 LOC104961504,LOC106608390 coding upstream 44780 42029377 ~ 42045091 (+)
AMCG00004299 mapre3b,LOC107392001,LOC100704238 coding upstream 65131 42010685 ~ 42024740 (+)
AMCG00004296 NA coding upstream 125397 41949371 ~ 41964474 (+)
AMCG00004305 NA coding downstream 121698 42220020 ~ 42259741 (+)
AMCG00004309 wtap,LOC105015380,LOC100196682 coding downstream 240192 42338514 ~ 42347082 (+)
AMCG00004308 acat2,LOC107696107,LOC107726488,LOC107732634,LOC107601581,LOC107693222,LOC107549121,LOC102788057 coding downstream 251909 42350231 ~ 42355400 (+)
AMCG00004314 NA coding downstream 450018 42548340 ~ 42576558 (+)
AMCG00004315 NA coding downstream 493544 42591866 ~ 42634968 (+)
G7231 NA non-coding upstream 218 42087791 ~ 42089653 (+)
G7221 NA non-coding upstream 22146 42065497 ~ 42067725 (+)
G7182 NA non-coding upstream 123638 41966014 ~ 41966233 (+)
G7101 NA non-coding upstream 483112 41605110 ~ 41606759 (+)
G7102 NA non-coding upstream 560563 41523053 ~ 41529308 (+)
G7272 sod2,LOC102787761 non-coding downstream 235103 42333425 ~ 42336643 (+)
G7278 NA non-coding downstream 266546 42364868 ~ 42365654 (+)
G7288 NA non-coding downstream 278303 42376625 ~ 42379961 (+)
G7293 NA non-coding downstream 377254 42475576 ~ 42475886 (+)
G7418 NA non-coding downstream 1137496 43235818 ~ 43237653 (+)
G7094 NA other upstream 582640 41459576 ~ 41507231 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 1748636 40326410 ~ 40341235 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 4242151 37832623 ~ 37847720 (+)
G6369 NA other upstream 5089713 36999357 ~ 37000158 (+)
G6328 NA other upstream 5198125 36861547 ~ 36891746 (+)
AMCG00004304 NA other downstream 112108 42210430 ~ 42216362 (+)
G7329 fabp7,LOC108247051,LOC104945778 other downstream 590457 42688779 ~ 42691109 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 2519863 44618185 ~ 44640732 (+)
AMCG00004380 NA other downstream 3863688 45962010 ~ 45968306 (+)
G7999 NA other downstream 6048566 48146888 ~ 48147156 (+)

Expression


Co-expression Network