AMCG00004330 (fam184a,LOC106607780,LOC106571378)


Basic Information

Item Value
gene id AMCG00004330
gene name fam184a,LOC106607780,LOC106571378
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 43329372 ~ 43338860 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004330
GAGAAGGAGCTGTTGGGACGTATTTCCGAGCTCCAAGAGGAGGTGCTCCGCAGAGAGAGCCACATCGCCGAGCTGGACAAGGAGATCCACTCGCTGCATGAGAATATCAGCACCCTCACCAAGGAGCTGGAGCTCAAGGGCAAGGAGGTCCTCAAGATCCGCAGTGAAGCCAATCAGCAGATCAGGGCCCACGAGCAGGAGCTGAACAAGAAGCACGATAAGGAACTGAACGAGATGTCAATGATCCACATGCGCGAGACGCAGAACATGCTGTCAGACTTCAATAAGGCCCAGGATCTTCTGAAGGACAAGATCTCAGCCTTACAGATCCTGCTAGAAGGCACAGAGGACAAGTTCAGGAATCGCGAGAGCAGGCCAGAAGATCTGCAGTTAATTGCCGAGTTAAAAGAAATGGTGACCGAGAGAGAGTCCCTTGTGAAGAAGCTGGTTGACGACAAGAAGTTCTATCAACTGGAACTGGTGAACAGAGAGACTAATTTTAACAAAGTATTTAATTCTAACCCCAATGTTGGTGTTATTAACCCCCTCATAAAGcaaaagaaaaagaatgaaaaatcaCCAAACAGATTCATCAGTTCTCCAAATCTAAGTGCACTGGACCCAGCGGGGGCGGGGAACGGGCCACCCCAGCATAACCGCCTAGAGCCAATCCCCAACTCCCCCATTCACGACCTTGAGCTCAACAGTAGCAAACCTCTGCCCCAACCAACACCTCCGAAAGAGCCCAAGAAATTCCTG

Function

symbol description
fam184a Located in extracellular space.

NR:

description
PREDICTED: protein FAM184A isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004330 True 759 mRNA 0.50 5 43329372 43338860

Neighbor

gene id symbol gene type direction distance location
AMCG00004331 NA coding upstream 11964 43295652 ~ 43317408 (+)
AMCG00004327 man1a1,LOC102782693,LOC106607779 coding upstream 95079 43216106 ~ 43234293 (+)
AMCG00004328 man1a1,LOC107833082,LOC106959811,LOC103360425,LOC107083523 coding upstream 152313 43157068 ~ 43177059 (+)
AMCG00004326 NA coding upstream 215101 43113684 ~ 43114271 (+)
AMCG00004321 NA coding upstream 353587 42927068 ~ 42975785 (+)
AMCG00004329 LOC107549683 coding downstream 11919 43350779 ~ 43362687 (+)
AMCG00004332 NA coding downstream 41810 43380670 ~ 43411096 (+)
AMCG00004335 NA coding downstream 188120 43526980 ~ 43534658 (+)
AMCG00004342 gopc,LOC106607787,LOC107603060,LOC107678854 coding downstream 271921 43610781 ~ 43611095 (+)
AMCG00004338 LOC106571388,LOC106607787 coding downstream 286755 43625615 ~ 43631896 (+)
G7418 NA non-coding upstream 91719 43235818 ~ 43237653 (+)
G7293 NA non-coding upstream 853486 42475576 ~ 42475886 (+)
G7288 NA non-coding upstream 949411 42376625 ~ 42379961 (+)
G7278 NA non-coding upstream 963718 42364868 ~ 42365654 (+)
G7272 sod2,LOC102787761 non-coding upstream 992729 42333425 ~ 42336643 (+)
G7441 NA non-coding downstream 7490 43346350 ~ 43346959 (+)
G7485 NA non-coding downstream 252890 43591750 ~ 43595078 (+)
G7569 pvrl1b,nectin1,LOC107563312,LOC107758086,LOC107691861,LOC107670612,LOC107561861 non-coding downstream 739485 44078345 ~ 44088037 (+)
G7584 NA non-coding downstream 997591 44336451 ~ 44336681 (+)
G7614 NA non-coding downstream 1191480 44530340 ~ 44543143 (+)
G7329 fabp7,LOC108247051,LOC104945778 other upstream 638263 42688779 ~ 42691109 (+)
AMCG00004304 NA other upstream 1113010 42210430 ~ 42216362 (+)
G7094 NA other upstream 1822141 41459576 ~ 41507231 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 2988137 40326410 ~ 40341235 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 5481652 37832623 ~ 37847720 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 1279325 44618185 ~ 44640732 (+)
AMCG00004380 NA other downstream 2623150 45962010 ~ 45968306 (+)
G7999 NA other downstream 4808028 48146888 ~ 48147156 (+)
AMCG00004421 NA other downstream 5558257 48897117 ~ 49026355 (+)
G8099 NA other downstream 5593590 48932450 ~ 48934095 (+)

Expression


Co-expression Network