AMCG00004332


Basic Information

Item Value
gene id AMCG00004332
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 43380670 ~ 43411096 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004332
atgatgatgatgatgatgatgattgccACGGAGCGGAGATGGGCCCCTGGGTGCGAGTCAGCGTGGCAGACCACAGCCTCCGCTGCGAGCGGCAGCAGTAACCGCGGGAGACGCCTCAGCGCCACCTCCGACAGCGGGGACACAGGGATAGGCACGTCTTGCTCAGACAGCATTGAAGATCACTCCAGCTCCAGTGGCACGCTGTCCTTCAAGCCCATCAGGTCGCAGGTGACCATCCCCACTGCCCATGTGATGCCCTCCACCGCCGGCTCCAAGCGCAGCCCCCACTCACCTGTCGCTGACTGGAAGTCTGCCAATGGACCCCTGGACACACTCGGCGGTCAGGGAAGGTGTGGCCCAGGCGAGAAGGCTTGTGTGACAGGGGAAAACGTGGGTGACAGAAACATGGTGCAGAAATCCCAGCTGTACTACCTGCAGGAGCCCCAGAACCAGCAGAGGGCACTGGCAGGCTGTGAGCGCCGCTATCCGTACGATCTGTGCAGCAAAGCACAAAGCCCAACTGCCTCGCCCCTCAAACCCAGTACCTTAGTCTTGACCTACAGTGCCTTACCTGAGACCAAGCCAGTGGGGCCAGGCCACCCAGCCTCTGAACAGAGATGCCTGCCGCTAGGGCACCAGACTGTGGGGGGATCACCCATCCAGCCTGCTGTGAGGACACAGATGTGGCTCAGTGAGCAGATGCACTCGAACCCTGTGGAGTACAGCAGGCCAGCTCCAGACGGCCTGTGTGACCTGTCAGCCTGGCCACGGGGACAGCAGCTAGAGTGTCTCCGTCAGAATGCTGAGCTGACGCAGATTCTCACAGGATCTCCTCTCCCAGGGGACACCTTACTGAAAGTCAAAGAGGGTCTCCTGCGACAGAAAGAGATGCTGGCCATTGTTCAGGAAAGGGCCAGAGGGCTGCAGGAGCGAGTCGGTGAGCTGGAGAAGAGCCTGGGCCAGAGCCGAGTCCTAGTCCAGGAGAAGGAGACCCTGATTGAGTCCcagaggaagaaggagaaggagctgGTTGGCTCTGTACAGAGCTTGCAGCAGAAAGTGGAGCAGTGCCTTGAGGATGGCGTCAGGCTGTCCATGCTGGACATGAAACGGCTGGAATGCGACAACACGCGTCTCCAGGAGCAGCACAGCCAGAGCACCAAGGCAACAGAGAAGAAGCTGTTGATGGAAAAAACAATTTCACAGGACCTAAGGAAGCAGCTGCTAGAAAAAGAGGCCGACCTGCAgaaactctctctcacacctgAGGAGAAGCAGAGTCAGGCAGGGGAGGCGAGTGGTCTGGGAGGAGAAGAGCCACCCCGTGCCGTGGGCCAGCTGCTGAGGGAGATGGCACTGTGTCTGATGGACCTCAGGGCCCTGTGTAGCATCCTGACCCAGAGAGCCCAGGGCAAGGAGCCCAACCTCGGCCTGCTGCTGGGAATCAAGTGTAAGTTCTGTTCTCTCGCACCGTTGCGCCATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004332 True 1485 mRNA 0.59 9 43380670 43411096

Neighbor

gene id symbol gene type direction distance location
AMCG00004329 LOC107549683 coding upstream 17983 43350779 ~ 43362687 (+)
AMCG00004330 fam184a,LOC106607780,LOC106571378 coding upstream 41810 43329372 ~ 43338860 (+)
AMCG00004331 NA coding upstream 63262 43295652 ~ 43317408 (+)
AMCG00004327 man1a1,LOC102782693,LOC106607779 coding upstream 146377 43216106 ~ 43234293 (+)
AMCG00004328 man1a1,LOC107833082,LOC106959811,LOC103360425,LOC107083523 coding upstream 203611 43157068 ~ 43177059 (+)
AMCG00004335 NA coding downstream 115884 43526980 ~ 43534658 (+)
AMCG00004342 gopc,LOC106607787,LOC107603060,LOC107678854 coding downstream 199685 43610781 ~ 43611095 (+)
AMCG00004338 LOC106571388,LOC106607787 coding downstream 214519 43625615 ~ 43631896 (+)
AMCG00004343 NA coding downstream 259924 43671020 ~ 43721979 (+)
AMCG00004346 NA coding downstream 384125 43795221 ~ 43798475 (+)
G7441 NA non-coding upstream 33711 43346350 ~ 43346959 (+)
G7418 NA non-coding upstream 143017 43235818 ~ 43237653 (+)
G7293 NA non-coding upstream 904784 42475576 ~ 42475886 (+)
G7288 NA non-coding upstream 1000709 42376625 ~ 42379961 (+)
G7278 NA non-coding upstream 1015016 42364868 ~ 42365654 (+)
G7485 NA non-coding downstream 180654 43591750 ~ 43595078 (+)
G7569 pvrl1b,nectin1,LOC107563312,LOC107758086,LOC107691861,LOC107670612,LOC107561861 non-coding downstream 667249 44078345 ~ 44088037 (+)
G7584 NA non-coding downstream 925355 44336451 ~ 44336681 (+)
G7614 NA non-coding downstream 1119244 44530340 ~ 44543143 (+)
G7638 NA non-coding downstream 1163235 44574331 ~ 44574997 (+)
G7329 fabp7,LOC108247051,LOC104945778 other upstream 689561 42688779 ~ 42691109 (+)
AMCG00004304 NA other upstream 1164308 42210430 ~ 42216362 (+)
G7094 NA other upstream 1873439 41459576 ~ 41507231 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 3039435 40326410 ~ 40341235 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 5532950 37832623 ~ 37847720 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 1207089 44618185 ~ 44640732 (+)
AMCG00004380 NA other downstream 2550914 45962010 ~ 45968306 (+)
G7999 NA other downstream 4735792 48146888 ~ 48147156 (+)
AMCG00004421 NA other downstream 5486021 48897117 ~ 49026355 (+)
G8099 NA other downstream 5521354 48932450 ~ 48934095 (+)

Expression


Co-expression Network