AMCG00004333


Basic Information

Item Value
gene id AMCG00004333
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 43467169 ~ 43485249 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004333
GGGGTCCGACCACTTCCGCCAATTAACTAATTGCAATATGCGCAGTATATGTATTCCTATTTCacatgtgtatctatatattgaCAGTTgtcaaaacaatcaataaagcTTATGATAATacgttttttattgttaaaaacgCTGATCAAAATCTATTTGGAGTTGTGTCCCCCGGGGGGCAATCATGATGGTTTCTCCCAATGTGTTATGCCCTCCGCCGTAATGGCGCCCAAGTGCAGTTGGGGAAAATGGCGCTTGTGGATGGAGGTTGGGAGGAGCTGCGGGAGCAGTTGGCTTTGTTGTCCGGCCGGTCTTCCGTTGTAGTGGACGTTGGGCCCACGGTGCATCAATACTCCCACACCGGACTGCTACACCTGAGCGACGAGGTCCTCGTCCTCATCCTGCGGCTTCTGGACCCCGTCTCCTTGCTCCGGGTGGGCAGCACCTGCAGGACGCTGTTCAGGGTGTGCAGTTGCTGCTCCCTGTGGTCAAGACTCCTCCAGGCGTCATTTGGGGTTTCATTTACCACTGCCACCATCTCCATCTCCGCCAAGCATTCTTTCCGCCTCCTGTTCATGTGGAGGACGCTGTACACAAACCTGCACTGCAACAGGTCCCTGCAGGAGAAGCTATTTACAGAGAGGCCTCCCCCAAAATACTGGGTCCAGTGGCTGGTGCTTGAAGAGAGGGTGCCCTTGCCTCCAGTCAGACTACCTGATTGTGAAATTGAGAAACTCTGGGGAATAGGCAGAGAATCGCTCGAAGGAAAATGCAGAGAAGAAGCTGAAGATGGTGAtggcaatgttttaaaaatggagTGGAAGGAACTGTTTAACCTTAACGTCCAGCACCATGGCAGTGTTGCCAACATCCTTCAATATGTTCTTCATCAGCAGGAGGAAAATGACCACAGGGATTTGGAGGCCTTGTACCAGCAGTACACTCAGTTCAGGTTCCAGTGGCACTTTTCCTACTGGCTGTTCAAGCAGCCGAAGCCCTTCGACCGACAACTGCGGATGATCTTTTTGCAGTGGCAGGGGCACAGTAAGCAGAAGGTGTCGGGCTGGGGGTCGCCCATCTGCAACCTGAAGTATCTTGCTTCCCTGCATCACATCACCCTCGATTACTGGAGGGGCAAACTGGCAAATGGGGACGAGAACGCTGGCATTCGAACAGTGGAAAACTACTTTTCAATGTGTAAATCCTTGGTAGCATGGATTCTAGGTCAGAACTGGGGAAGATTCAAACGAAGAAAgGTATACCTGGACACTCTGGAGGGAGTGCACAGGATGCTGAAGAAGGAGCTGCACACCTCTGTGATCGATCACAAGCAATTCTGGCAGGTTGCCAAAGTTCAGATGGCGAGAGTGTGCAAGCTGGAGGAGACTGCGGTAAACTATGTCAACTGGAGAATGATTGATGCTGTCCCTTACTACAGGCTGTACATGGTGTCTGGCTGTGCTGTCTACCTGGAGCACATTAAAGTGTTTCTGCGCAGAAAGAGGCTGATCCACGACTGGATTTTTCAAGAGGAAAACACCTGGGTCAGACGCCTGCTGTCAGAGGATCTCTACCTGCTTTTGCAGTTTGACACAAAGATATCTGAAGGCAACCTTCATGGAGACTCCCTCTCTGCCCACCTGAGTCGCATCATCTGGCTTTATTTACACTCCGGTCAGCAGCTGTACATGGAGGCTGTGAAGGGATTTGTGCAGCATAGTGCTCAAGCAAGACTTGGATATTGCGTATTGGTCTCAGTCTCACCTGGTTTTTACTCGCCATCTGTTAACTGAGACGTGCGCTTCCCCTGTAGCATGGAGATTGCTgctcttactgtatttttaattacttcagcGGCTTTGATGCTGTAGTGGGAGTGATGAAAGTCAGGGATATATAATTAATGTCTTGTAAGGagatttttaagtattttagctctaatgtaattgatatatctttaagtgtttttaatgtagtgATATCTGAGGGATTTCCTAAATGAAGCGATTCCTCCGAATGATTTGTAATTCTTCATTCATGTCAGtttgaattattaatgcatttctgcttttatttctgtaattttagattttatttgtgCCATACACCTTGTGCATGGATTTTGGGCCATGTCTTGGATTGAGTAAACCATATGGATGCTCCCTATAATGTGTGCcgtgctctttttttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004333 True 2195 mRNA 0.47 8 43467169 43485249

Neighbor

gene id symbol gene type direction distance location
AMCG00004325 NA coding downstream 431891 42975752 ~ 43035278 (-)
AMCG00004322 NA coding downstream 541370 42922676 ~ 42925799 (-)
AMCG00004324 NA coding downstream 546975 42914142 ~ 42920194 (-)
AMCG00004323 LOC107675226,LOC107602186,LOC105017938,LOC107716890,LOC107697125,LOC107598086 coding downstream 565286 42901035 ~ 42901883 (-)
AMCG00004319 hsf2 coding downstream 714352 42738503 ~ 42752817 (-)
AMCG00004337 slc35f1,LOC107727669,LOC107678858,LOC107743307,LOC107697151 coding upstream 20 43485269 ~ 43514436 (-)
AMCG00004334 slc35f1,LOC107697151,LOC107678858,LOC107743307,LOC107549682 coding upstream 34730 43519979 ~ 43539410 (-)
AMCG00004339 NA coding upstream 107904 43593153 ~ 43604125 (-)
AMCG00004341 NA coding upstream 120620 43605869 ~ 43608735 (-)
AMCG00004340 NA coding upstream 149898 43635147 ~ 43671248 (-)
G7419 NA non-coding downstream 229559 43235818 ~ 43237610 (-)
G7336 NA non-coding downstream 729319 42725912 ~ 42737850 (-)
G7335 NA non-coding downstream 747478 42692754 ~ 42719691 (-)
G7270 NA non-coding downstream 1154051 42312919 ~ 42313118 (-)
G7268 NA non-coding downstream 1202192 42264690 ~ 42264977 (-)
G7554 NA non-coding upstream 383214 43868463 ~ 43868706 (-)
G7580 NA non-coding upstream 597848 44083097 ~ 44089780 (-)
G7583 NA non-coding upstream 692397 44177646 ~ 44177988 (-)
G7585 NA non-coding upstream 851022 44336271 ~ 44336570 (-)
G7587 NA non-coding upstream 923111 44408360 ~ 44408665 (-)
AMCG00004336 NA other downstream 16914 43402953 ~ 43450255 (-)
AMCG00004313 NA other downstream 936163 42376726 ~ 42531006 (-)
AMCG00004302 NA other downstream 1399505 42064989 ~ 42067664 (-)
G6792 hs90b,hsp90bb,hsp90ab1 other downstream 3618046 39841935 ~ 39849123 (-)
AMCG00004203 NA other downstream 6085216 37324010 ~ 37381953 (-)
G7608 NA other upstream 1035665 44520914 ~ 44522213 (-)
AMCG00004364 NA other upstream 1054914 44540163 ~ 44561575 (-)
AMCG00004372 LOC108423781,LOC105921217 other upstream 1137941 44623190 ~ 44712051 (-)
G7868 NA other upstream 2821677 46306926 ~ 46307319 (-)
G7882 LOC107575789 other upstream 2982876 46468125 ~ 46468434 (-)

Expression


Co-expression Network