AMCG00004341


Basic Information

Item Value
gene id AMCG00004341
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 43605869 ~ 43608735 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004341
AACTACAGCTACAGTTGTAACAATCAATGCCCAAAGAAATGTGTATGTGAAAATGCAAAGTCAATGCAATGCTACAGGCTGCATGCTGTACCTCCTGGTATTGCAAGGGATATAAAACAACTGAACCTGGGATACAACCACATAAAGGAGTTAAAGATAAGTGATTTTACCGGATTGACAGGACTTGAAGAAATTATTTTGTCATCATGTGGAGTAGAATCAATCGAATTCAATACTTTTCAGATCCATAGCCATTTAAAATCCCTGGACCTCCCAAAGAACAAGTTAAAACACGTGCCACATGGACTTCCCCACAGCCTGGAAATTCTCAAGCTGGGGAATAATAGGATACAGAACCTACAAGAGTCAGCTTTTGATGGATTAAAAAATCTGCATGTTCTTGACCTTCAAAACAACCTCCTATCCACCATTCATGCAAACACACTTTCTTCTCTGGTGAAGTTGGAAAGTCTTTATCTAGATGGAAATCATATTGCATCTATACTGGGTTCTCCGAATCTGCCTCAGCTCAGACAGTTTAGCATAAGGAATAACAGAATTACATCCTTGCCTTCAAGATTTTTTACATCTTTACAGTCCCTGAAGACTTTAAGTCTGTCTGACAATCATCTTGTCAAAGTTCCACAAGACCTCCCACGTTCACTGTGGTCCCTGAATTTAGATAAAAATCAGATAAGGGCACTGAGAAGCCGGGAAATGAGCCATCTGAACCATCTTTCAGTTTTGTCTGTGTCCCATAACAAGCTGGTTTCCATTGATGGTAGCCTTTGCCTGCCTAACCTCACCATTTTGGAGCTCTCTGGAAACCACATCAGGGTGCTGCCAAGCAGACTGACACTGAAACTGGAAAAGTTGGACTTTCGACAGAATATGATTAAGGAAGTCACCCAGCAACACCTTGCAGGAATGAAACTTTTGAAACATCTGTTTCTGGAGAACAACAACATCCAGCACATTGAAGCAGGAGCCCTGAGGAACTGCCTGCACTTGACAAACCTGGCACTGGAGCAAAACTCCCTCCCCGCCATTCCAGATGGGCTTCCTGAGACACTGGTTCGGCTGGATCTGAAGGGAAACCACATCAAAGTTGTTGGAGAACAAGAACTCAAGAACCTCAGGAGACTCCAGGTGTTGAACCTGAGGAACAACAAGCTGTCCACTCTAAGCTTGCTTGCTCTGGAAATGCTTCCCAGGCTGAGAAAGGTTTACCTGGATGGCAATCCTTGGAACTGCAGCTGTGAACTCCTCAGGGTCAAGAGGAGATTGCTGGCGAGGCACGTTGAGGTCCGCAGTGACCTCTGCCTTGATCTCCTCCACCCACAGGGGGAGAATTGGCGGGCTCATCTCAGGGCTCAGGATAAGTGTGAGGAATACATTCGGGAAACCATTCAAGACAGCCAAGTGAGGATCAGTCCAAGTATAGACAGGACAGGGCAAATGGAGCCGGCAGATTTTGAAGAATACTATGACTATGATACAGAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004341 True 1506 mRNA 0.45 3 43605869 43608735

Neighbor

gene id symbol gene type direction distance location
AMCG00004339 NA coding downstream 1744 43593153 ~ 43604125 (-)
AMCG00004334 slc35f1,LOC107697151,LOC107678858,LOC107743307,LOC107549682 coding downstream 66459 43519979 ~ 43539410 (-)
AMCG00004337 slc35f1,LOC107727669,LOC107678858,LOC107743307,LOC107697151 coding downstream 91433 43485269 ~ 43514436 (-)
AMCG00004333 NA coding downstream 120620 43467169 ~ 43485249 (-)
AMCG00004325 NA coding downstream 570591 42975752 ~ 43035278 (-)
AMCG00004340 NA coding upstream 26412 43635147 ~ 43671248 (-)
AMCG00004344 NA coding upstream 116937 43725672 ~ 43734731 (-)
AMCG00004345 NA coding upstream 169414 43778149 ~ 43789688 (-)
AMCG00004347 NA coding upstream 390182 43998917 ~ 44002983 (-)
AMCG00004348 nectin1,LOC102782356 coding upstream 406384 44015119 ~ 44047238 (-)
G7419 NA non-coding downstream 368259 43235818 ~ 43237610 (-)
G7336 NA non-coding downstream 868019 42725912 ~ 42737850 (-)
G7335 NA non-coding downstream 886178 42692754 ~ 42719691 (-)
G7270 NA non-coding downstream 1292751 42312919 ~ 42313118 (-)
G7268 NA non-coding downstream 1340892 42264690 ~ 42264977 (-)
G7554 NA non-coding upstream 259728 43868463 ~ 43868706 (-)
G7580 NA non-coding upstream 474362 44083097 ~ 44089780 (-)
G7583 NA non-coding upstream 568911 44177646 ~ 44177988 (-)
G7585 NA non-coding upstream 727536 44336271 ~ 44336570 (-)
G7587 NA non-coding upstream 799625 44408360 ~ 44408665 (-)
AMCG00004336 NA other downstream 155614 43402953 ~ 43450255 (-)
AMCG00004313 NA other downstream 1074863 42376726 ~ 42531006 (-)
AMCG00004302 NA other downstream 1538205 42064989 ~ 42067664 (-)
G6792 hs90b,hsp90bb,hsp90ab1 other downstream 3756746 39841935 ~ 39849123 (-)
G6441 NA other downstream 6237047 37367985 ~ 37368822 (-)
G7608 NA other upstream 912179 44520914 ~ 44522213 (-)
AMCG00004364 NA other upstream 931428 44540163 ~ 44561575 (-)
AMCG00004372 LOC108423781,LOC105921217 other upstream 1014455 44623190 ~ 44712051 (-)
G7868 NA other upstream 2698191 46306926 ~ 46307319 (-)
G7882 LOC107575789 other upstream 2859390 46468125 ~ 46468434 (-)

Expression


Co-expression Network