AMCG00004346


Basic Information

Item Value
gene id AMCG00004346
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 43795221 ~ 43798475 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004346
ATTTGATATTCGGATGTTTGTCAAGTCACTAGCAATGATTTATACCATTGAAATGATTAACAATTCTTCAATGCTAGCTGATGTGAAACTGGGCTATGAAATCTATGACACGTGTGGAGATGTCAGCATGGCAATCAAAACAGTTTTAAAGCTCATGGATAATGAAGGTGATTCTGCTAAAAACTGTTTTCCACTGGACAGTAATTTCAGCAGCTATGATCCACATGTAAAAGTAATCATTGGAGAGAGACATTCAGAAGTATCAATTGCAGTGGCTCGTTTACTAACTCTGCTCTATATACCACAGATTAGCTATGCATCAACAAGTGAAGTTCTCAGCAGCAAGACCAAATTTCCAACTTTTCTGCGTACAGTCCCAAGTGATGCTTGCCAGACGAAGGCTATTGCTGAACTTGCATTGCATTTGAACTGGAAAAGCATTGGAGCCATTGGAAGTGATGATGAATACGGCAAATATGGAGTTGAATGTTTGATGGAGCATGCAACAGACCTTGACTTGTGTATTGCCTTCAAGGAGATTATTTCAGCAgatttttcaaaaaacaataataacactcGAACTGAGTTACAAAAGATAATTAATACAATCATCAACTCATCTGCTGAGGTTATTGTAATTTTCACTCAGGAGTTAAATGTTAAGATACTGTTTGAAGAGGCCATTAAACTTGATATAAACAGAACCTGGATTGCAAGTGATGCATGGTCTACTTCGAGTCTTATATCGAGCATGAGGGGTATTGAACATATTGGGACGATTATTGGTTTTGTTCCCAATAGAAATGAAGTTCCTGGATTTAAGGagtatttacataatttaattatacaagAAGAATATAAGCATATTGGCTTTTTCTGTGAATACCTGCACTCTTATCCTCTGTGCTCCAACTCAGCCTCTGAAGATAAAGGAAACTGCTCAATGAATTTGTATCCAAATGTAACTGGAAGCTGTGCAGATATAAATTGTCTTACTAATTATATTGATACTGATGAGTGTTACAACACATATCTTGCAGTAAATGTCATAGCTAAAGCTTTgcaaagccttttaaaatgccaaAGTAAAACATGTGACAGAAAATTCAAGTTCTCAGCCTGGGAGCTACTGGAAGAACTAAAAAAAGTAAAGTTTACACTGAATAACAGGACACACATGGAATTTGATCAAAATGGAGACCCCAGTGTGGGATATGATATACTTGGTTGGAAAGCATCAAATGGATCTGTGGATATCGTGCAAATTGGAAAATATAGTTACTCTGGAGAATTAAATTTGACTGATGACTTTCTGAAACCATTGGAAAATGTTACGataaCATATGCTAACTGTTCCAAATCCTGTGCGCCAGGACatgaattaattgaaacaaagcaaaaggcCTGTTGCAGTGTTTGTACTGCCTGTGAGAAAGGATTTTATTCCCCTGGAGAACaaaatcaatactCGTCTCCTAGGAAAGACACATGTTTGGACAAAGAAGTTGTTTTCCTGCAGTGGGATGATGGATTTGCTATTTTTCTGGTAGTATTTGATATAGCAGGGATCATCGTCACACTCCTGATTGCTGTTCTGTTGGCTAGACATTTGAAAACACCAGTTGTGAAATGTGCTGGAggttatttttgctttgtgatGCTTATTGCACTATTGGGAAGTTTTTGCAGCATTTGGATGTTCATTGGAAAACCTACTACACTAACTTGTCAGATTGGCCTCCCACTGTTTGGCATTTCATTTTCCCTCtgtgtttcatgtattttagCAAACCTGTTTCAGATATTTGTTGGTTTCTCATTTGACATTAAAATCCACAAGTCAAAATGGTGGAACAAtccatattttattatcatgGTCTTTACAGGAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004346 True 1891 mRNA 0.37 5 43795221 43798475

Neighbor

gene id symbol gene type direction distance location
AMCG00004343 NA coding upstream 73242 43671020 ~ 43721979 (+)
AMCG00004338 LOC106571388,LOC106607787 coding upstream 163325 43625615 ~ 43631896 (+)
AMCG00004342 gopc,LOC106607787,LOC107603060,LOC107678854 coding upstream 184126 43610781 ~ 43611095 (+)
AMCG00004335 NA coding upstream 260563 43526980 ~ 43534658 (+)
AMCG00004332 NA coding upstream 384125 43380670 ~ 43411096 (+)
AMCG00004351 NA coding downstream 612124 44410599 ~ 44411051 (+)
AMCG00004354 NA coding downstream 699953 44498428 ~ 44498907 (+)
AMCG00004353 NA coding downstream 713372 44511847 ~ 44512326 (+)
AMCG00004352 NA coding downstream 750957 44549432 ~ 44552133 (+)
AMCG00004367 LOC107691633,LOC105921217,LOC103395053 coding downstream 909538 44708013 ~ 44711574 (+)
G7485 NA non-coding upstream 200143 43591750 ~ 43595078 (+)
G7441 NA non-coding upstream 448262 43346350 ~ 43346959 (+)
G7418 NA non-coding upstream 557568 43235818 ~ 43237653 (+)
G7293 NA non-coding upstream 1319335 42475576 ~ 42475886 (+)
G7288 NA non-coding upstream 1415260 42376625 ~ 42379961 (+)
G7569 pvrl1b,nectin1,LOC107563312,LOC107758086,LOC107691861,LOC107670612,LOC107561861 non-coding downstream 279870 44078345 ~ 44088037 (+)
G7584 NA non-coding downstream 537976 44336451 ~ 44336681 (+)
G7614 NA non-coding downstream 731865 44530340 ~ 44543143 (+)
G7638 NA non-coding downstream 775856 44574331 ~ 44574997 (+)
G7644 NA non-coding downstream 789231 44587706 ~ 44587984 (+)
G7329 fabp7,LOC108247051,LOC104945778 other upstream 1104112 42688779 ~ 42691109 (+)
AMCG00004304 NA other upstream 1578859 42210430 ~ 42216362 (+)
G7094 NA other upstream 2287990 41459576 ~ 41507231 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 3453986 40326410 ~ 40341235 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 5947501 37832623 ~ 37847720 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 819710 44618185 ~ 44640732 (+)
AMCG00004380 NA other downstream 2163535 45962010 ~ 45968306 (+)
G7999 NA other downstream 4348413 48146888 ~ 48147156 (+)
AMCG00004421 NA other downstream 5098642 48897117 ~ 49026355 (+)
G8099 NA other downstream 5133975 48932450 ~ 48934095 (+)

Expression


Co-expression Network