Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00004347 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 43998917 ~ 44002983 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00004347 | True | 240 | mRNA | 0.62 | 2 | 43998917 | 44002983 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004345 | NA | coding | downstream | 209229 | 43778149 ~ 43789688 (-) |
| AMCG00004344 | NA | coding | downstream | 264186 | 43725672 ~ 43734731 (-) |
| AMCG00004340 | NA | coding | downstream | 327669 | 43635147 ~ 43671248 (-) |
| AMCG00004341 | NA | coding | downstream | 390182 | 43605869 ~ 43608735 (-) |
| AMCG00004339 | NA | coding | downstream | 394792 | 43593153 ~ 43604125 (-) |
| AMCG00004348 | nectin1,LOC102782356 | coding | upstream | 12136 | 44015119 ~ 44047238 (-) |
| AMCG00004350 | pvrl1b,LOC107563312,LOC107691861,LOC107758086,LOC107670612,LOC107561861,LOC106581605 | coding | upstream | 84393 | 44087376 ~ 44091833 (-) |
| AMCG00004349 | nectin1,LOC102782356 | coding | upstream | 99100 | 44102083 ~ 44111125 (-) |
| AMCG00004357 | NA | coding | upstream | 484425 | 44487408 ~ 44495762 (-) |
| AMCG00004366 | NA | coding | upstream | 497891 | 44500874 ~ 44508818 (-) |
| G7554 | NA | non-coding | downstream | 130211 | 43868463 ~ 43868706 (-) |
| G7419 | NA | non-coding | downstream | 761307 | 43235818 ~ 43237610 (-) |
| G7336 | NA | non-coding | downstream | 1261067 | 42725912 ~ 42737850 (-) |
| G7335 | NA | non-coding | downstream | 1279226 | 42692754 ~ 42719691 (-) |
| G7270 | NA | non-coding | downstream | 1685799 | 42312919 ~ 42313118 (-) |
| G7580 | NA | non-coding | upstream | 80114 | 44083097 ~ 44089780 (-) |
| G7583 | NA | non-coding | upstream | 174663 | 44177646 ~ 44177988 (-) |
| G7585 | NA | non-coding | upstream | 333288 | 44336271 ~ 44336570 (-) |
| G7587 | NA | non-coding | upstream | 405377 | 44408360 ~ 44408665 (-) |
| G7609 | NA | non-coding | upstream | 517192 | 44520175 ~ 44520818 (-) |
| AMCG00004336 | NA | other | downstream | 548662 | 43402953 ~ 43450255 (-) |
| AMCG00004313 | NA | other | downstream | 1467911 | 42376726 ~ 42531006 (-) |
| AMCG00004302 | NA | other | downstream | 1931253 | 42064989 ~ 42067664 (-) |
| G6792 | hs90b,hsp90bb,hsp90ab1 | other | downstream | 4149794 | 39841935 ~ 39849123 (-) |
| G6441 | NA | other | downstream | 6630095 | 37367985 ~ 37368822 (-) |
| G7608 | NA | other | upstream | 517931 | 44520914 ~ 44522213 (-) |
| AMCG00004364 | NA | other | upstream | 537180 | 44540163 ~ 44561575 (-) |
| AMCG00004372 | LOC108423781,LOC105921217 | other | upstream | 620207 | 44623190 ~ 44712051 (-) |
| G7868 | NA | other | upstream | 2303943 | 46306926 ~ 46307319 (-) |
| G7882 | LOC107575789 | other | upstream | 2465142 | 46468125 ~ 46468434 (-) |
