AMCG00004351


Basic Information

Item Value
gene id AMCG00004351
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 44410599 ~ 44411051 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004351
ATGCTGGGTCCAGGGGTGTATGTAAGTCGAGACCTGCACAAAGCCAGCAGCTACCCTCTCATGCTGCCAGAGCATGTCGTGATGAGGTTGAAGGTCAGTGTGGGGAGGGTGAAAAAGATTGATGAGAAGAATCATCCCTTGCAAAAGACCTGGCATAGCCACGGCTACGACACGCCCTGGGTCCCTCCTAACTGTGGGATGGTGCCCAGTGGGCTAGAGGAGGACTGTGTCTGGGATCCCAGCGGGATCATACTTATAGATGTCATCACTCCTAGATGTCCTCAAGTACTGTTTCAGTTCTGGGCAAGCCCTTCACGGTATCAGCCACCTGTGATTGGTTACCCTCCATTGGAtgcctttccttctctctttccagTCAACCTCAATTCCTTGAGATCAATTCTCTTGGCCAGATTATTGCAAGGTCATTACTCTGGGAAACGCTTCCCATGA

Function

GO:

id name namespace
GO:0051607 defense response to virus biological_process
GO:0005737 cytoplasm cellular_component
GO:0003950 NAD+ ADP-ribosyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004351 True 453 mRNA 0.51 1 44410599 44411051

Neighbor

gene id symbol gene type direction distance location
AMCG00004346 NA coding upstream 612124 43795221 ~ 43798475 (+)
AMCG00004343 NA coding upstream 688620 43671020 ~ 43721979 (+)
AMCG00004338 LOC106571388,LOC106607787 coding upstream 778703 43625615 ~ 43631896 (+)
AMCG00004342 gopc,LOC106607787,LOC107603060,LOC107678854 coding upstream 799504 43610781 ~ 43611095 (+)
AMCG00004335 NA coding upstream 875941 43526980 ~ 43534658 (+)
AMCG00004354 NA coding downstream 87377 44498428 ~ 44498907 (+)
AMCG00004353 NA coding downstream 100796 44511847 ~ 44512326 (+)
AMCG00004352 NA coding downstream 138381 44549432 ~ 44552133 (+)
AMCG00004367 LOC107691633,LOC105921217,LOC103395053 coding downstream 296962 44708013 ~ 44711574 (+)
AMCG00004368 NA coding downstream 302974 44714025 ~ 44732599 (+)
G7584 NA non-coding upstream 73918 44336451 ~ 44336681 (+)
G7569 pvrl1b,nectin1,LOC107563312,LOC107758086,LOC107691861,LOC107670612,LOC107561861 non-coding upstream 322562 44078345 ~ 44088037 (+)
G7485 NA non-coding upstream 815521 43591750 ~ 43595078 (+)
G7441 NA non-coding upstream 1063640 43346350 ~ 43346959 (+)
G7418 NA non-coding upstream 1172946 43235818 ~ 43237653 (+)
G7614 NA non-coding downstream 119289 44530340 ~ 44543143 (+)
G7638 NA non-coding downstream 163280 44574331 ~ 44574997 (+)
G7644 NA non-coding downstream 176655 44587706 ~ 44587984 (+)
G7662 vps11,LOC107588528,LOC107578557,LOC107691631 non-coding downstream 205265 44616316 ~ 44617399 (+)
G7765 NA non-coding downstream 1508339 45919390 ~ 45921805 (+)
G7329 fabp7,LOC108247051,LOC104945778 other upstream 1719490 42688779 ~ 42691109 (+)
AMCG00004304 NA other upstream 2194237 42210430 ~ 42216362 (+)
G7094 NA other upstream 2903368 41459576 ~ 41507231 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 4069364 40326410 ~ 40341235 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 6562879 37832623 ~ 37847720 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 207134 44618185 ~ 44640732 (+)
AMCG00004380 NA other downstream 1550959 45962010 ~ 45968306 (+)
G7999 NA other downstream 3735837 48146888 ~ 48147156 (+)
AMCG00004421 NA other downstream 4486066 48897117 ~ 49026355 (+)
G8099 NA other downstream 4521399 48932450 ~ 48934095 (+)

Expression


Co-expression Network