AMCG00004353


Basic Information

Item Value
gene id AMCG00004353
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 44511847 ~ 44512326 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004353
ATGTGGTCAGAAGACGACTTCCCTTTCTGCTCTTTGCCTTGTCTGGAGAGCCAAAGTGAGCCTGTGGATGGGTTGATCTATGTCATGTACCATGGAACCACAAGGGCGATTGCACAAGAAATCAAGAAGAATGGTTTCAGACGGTCTCGGGATGGTATGCTGGGCCCAGGGGTGTATGTGAGTCGAGACCTGCAGAAAGCCAGCCGCTATCCTCTTAACGTGCCAGAGCACCAGCGAGTTGTGCTGAGGCTGAGGGTCGATGTGGGGAGGGTGAAGAAGATTGATAGACAAGGGCATCCATTACAGAAGACCTGGCATAACTACGGCTTCGACACGGCCTGGGTCCCTCCTTACTGTGGGATGGTGCCAAGTGGGCTGGAGGAGGACTGTGTCTGGGACCCCCGGAGGATCACAGTCATAGATGTCATCACTCCTAGACCTGCAGGGGGCAGATTTAATTATGGCTTGTATGACTGTTAA

Function

GO:

id name namespace
GO:0051607 defense response to virus biological_process
GO:0005737 cytoplasm cellular_component
GO:0003950 NAD+ ADP-ribosyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004353 True 480 mRNA 0.53 1 44511847 44512326

Neighbor

gene id symbol gene type direction distance location
AMCG00004354 NA coding upstream 12940 44498428 ~ 44498907 (+)
AMCG00004351 NA coding upstream 100796 44410599 ~ 44411051 (+)
AMCG00004346 NA coding upstream 713372 43795221 ~ 43798475 (+)
AMCG00004343 NA coding upstream 789868 43671020 ~ 43721979 (+)
AMCG00004338 LOC106571388,LOC106607787 coding upstream 879951 43625615 ~ 43631896 (+)
AMCG00004352 NA coding downstream 37106 44549432 ~ 44552133 (+)
AMCG00004367 LOC107691633,LOC105921217,LOC103395053 coding downstream 195687 44708013 ~ 44711574 (+)
AMCG00004368 NA coding downstream 201699 44714025 ~ 44732599 (+)
AMCG00004374 NA coding downstream 556589 45068915 ~ 45096943 (+)
AMCG00004375 NA coding downstream 613598 45125924 ~ 45143449 (+)
G7584 NA non-coding upstream 175166 44336451 ~ 44336681 (+)
G7569 pvrl1b,nectin1,LOC107563312,LOC107758086,LOC107691861,LOC107670612,LOC107561861 non-coding upstream 423810 44078345 ~ 44088037 (+)
G7485 NA non-coding upstream 916769 43591750 ~ 43595078 (+)
G7441 NA non-coding upstream 1164888 43346350 ~ 43346959 (+)
G7418 NA non-coding upstream 1274194 43235818 ~ 43237653 (+)
G7614 NA non-coding downstream 18014 44530340 ~ 44543143 (+)
G7638 NA non-coding downstream 62005 44574331 ~ 44574997 (+)
G7644 NA non-coding downstream 75380 44587706 ~ 44587984 (+)
G7662 vps11,LOC107588528,LOC107578557,LOC107691631 non-coding downstream 103990 44616316 ~ 44617399 (+)
G7765 NA non-coding downstream 1407064 45919390 ~ 45921805 (+)
G7329 fabp7,LOC108247051,LOC104945778 other upstream 1820738 42688779 ~ 42691109 (+)
AMCG00004304 NA other upstream 2295485 42210430 ~ 42216362 (+)
G7094 NA other upstream 3004616 41459576 ~ 41507231 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 4170612 40326410 ~ 40341235 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 6664127 37832623 ~ 37847720 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 105859 44618185 ~ 44640732 (+)
AMCG00004380 NA other downstream 1449684 45962010 ~ 45968306 (+)
G7999 NA other downstream 3634562 48146888 ~ 48147156 (+)
AMCG00004421 NA other downstream 4384791 48897117 ~ 49026355 (+)
G8099 NA other downstream 4420124 48932450 ~ 48934095 (+)

Expression


Co-expression Network