AMCG00004354


Basic Information

Item Value
gene id AMCG00004354
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 44498428 ~ 44498907 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004354
ATGTGGTCAGAAGATGACTTCCCTCCCTGCTCCTTGCCTTGCCTGCAGAGCCAGAGTGAGCCTGTGGATGACAGGACCTATGTCATGTACCACGGAACCACAAAGGCGATTGCACAAGAAATCATGAAGAATGGTTTCAGACGGTCTCGGGATGGCATGCTGGGCCCAGGGGTTTATGTGAGTCGAGATCTACAGAAAGCCAGCCGCTATCCTCTTAACGTGTCAGAGCACCAGCGAGCAGTGCTGAGGCTGAGGGTCAATGTAGGGAAGGTGAAGAGGATTGATAGACAAAGGCATCCGATGCAGAAGACCTGGCATGACCGTGGCTATGACACGGCCTGGGTCCCTCCTAACTGTGGGATGGTGTCCAGTGGGCTGGAGGAGGACTGTGTCTGGGACCCTCGGAGGATCACAGTCATAGATATCATCACTCCTAGACCAGCTGTGGGCAGAATGCAATATCCCTATTATGACCattaa

Function

GO:

id name namespace
GO:0051607 defense response to virus biological_process
GO:0005737 cytoplasm cellular_component
GO:0003950 NAD+ ADP-ribosyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004354 True 480 mRNA 0.53 1 44498428 44498907

Neighbor

gene id symbol gene type direction distance location
AMCG00004351 NA coding upstream 87377 44410599 ~ 44411051 (+)
AMCG00004346 NA coding upstream 699953 43795221 ~ 43798475 (+)
AMCG00004343 NA coding upstream 776449 43671020 ~ 43721979 (+)
AMCG00004338 LOC106571388,LOC106607787 coding upstream 866532 43625615 ~ 43631896 (+)
AMCG00004342 gopc,LOC106607787,LOC107603060,LOC107678854 coding upstream 887333 43610781 ~ 43611095 (+)
AMCG00004353 NA coding downstream 12940 44511847 ~ 44512326 (+)
AMCG00004352 NA coding downstream 50525 44549432 ~ 44552133 (+)
AMCG00004367 LOC107691633,LOC105921217,LOC103395053 coding downstream 209106 44708013 ~ 44711574 (+)
AMCG00004368 NA coding downstream 215118 44714025 ~ 44732599 (+)
AMCG00004374 NA coding downstream 570008 45068915 ~ 45096943 (+)
G7584 NA non-coding upstream 161747 44336451 ~ 44336681 (+)
G7569 pvrl1b,nectin1,LOC107563312,LOC107758086,LOC107691861,LOC107670612,LOC107561861 non-coding upstream 410391 44078345 ~ 44088037 (+)
G7485 NA non-coding upstream 903350 43591750 ~ 43595078 (+)
G7441 NA non-coding upstream 1151469 43346350 ~ 43346959 (+)
G7418 NA non-coding upstream 1260775 43235818 ~ 43237653 (+)
G7614 NA non-coding downstream 31433 44530340 ~ 44543143 (+)
G7638 NA non-coding downstream 75424 44574331 ~ 44574997 (+)
G7644 NA non-coding downstream 88799 44587706 ~ 44587984 (+)
G7662 vps11,LOC107588528,LOC107578557,LOC107691631 non-coding downstream 117409 44616316 ~ 44617399 (+)
G7765 NA non-coding downstream 1420483 45919390 ~ 45921805 (+)
G7329 fabp7,LOC108247051,LOC104945778 other upstream 1807319 42688779 ~ 42691109 (+)
AMCG00004304 NA other upstream 2282066 42210430 ~ 42216362 (+)
G7094 NA other upstream 2991197 41459576 ~ 41507231 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 4157193 40326410 ~ 40341235 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other upstream 6650708 37832623 ~ 37847720 (+)
AMCG00004355 hyou1,LOC100380749 other downstream 119278 44618185 ~ 44640732 (+)
AMCG00004380 NA other downstream 1463103 45962010 ~ 45968306 (+)
G7999 NA other downstream 3647981 48146888 ~ 48147156 (+)
AMCG00004421 NA other downstream 4398210 48897117 ~ 49026355 (+)
G8099 NA other downstream 4433543 48932450 ~ 48934095 (+)

Expression


Co-expression Network