AMCG00004356


Basic Information

Item Value
gene id AMCG00004356
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 44525064 ~ 44527659 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004356
acagataaaaCAAGAAACCAAGCGGAAAGATGAACAGCTTGTTCATATTTGGTGTTTTTGCAGCAGTGTCAGTGGTTCCTGTCTTGGGCCAGAGCATCATAGTGTGCCAGCAGGAAGATAAAGCACTGAGGATAGACTGTCTTCTCCAGCCCAAGGCCCACCAGATCACCACCTATGAGTTCTCCTTGTCCAAGTCAGGCAAAGAAACCCTGATCAACAGCAATGTGACAGGCATCACCACAGACCCAAAATACAAGGATAAGTCCCGAGTCATGCCCTTAGACCCATATGGGTACCGCCTGACCATGCCAGACTTCCAGCTCAATGAGAACACCACCTTCATCTGCAAGATTGGCAGCCAACACCAGAACTCTGGCGTTATTGAGAAAGGTAAGCTGGTGACCTGCTCCGCGTTCAGTGTGTGCCTCCACAGCTGTTCCTGGCTCCTGTATGCACTGCTCTCTCTGCCCCTGATCCAAAACTGGGGCCTGTCGTCtctctgaaacacaaacaaacaacaagtattacataaaaaaggatgataaaacaacaagaatatCTCAAATAAATCCAAGTATTTAGACAAAAATTGCTTTTATGAAACCAATGAAAGGAACATGCATGACCGCATTTCCACTGTGGCTGGGCACCGCCGCCCCCCTGCCGCCCCCCgcgttgtttttttggttgtgtaATTATCTGCCAAGGAATGGCTCTGCTGATGTACCAGTCTGTCAAGGAGAATAGTGAGAAACAAAACTTGTGCATCAATCCATACAAATTTTTGatcttatttaatatacatatgcatatatgcatatacCTTTGCAGTTGTTCCtgtatgcatattttttaactttatagTTTAGTTTCATCTTCCCTCTTGAAGAGATGCTAGATGTTACTTTAACCAGAACACAGAGATACAAATAtagtacactgtactgtatacagtaAACACAGTAAAATTACACATGCGGATCGATATAGCAGGGAGGTGAAAAGGTGCTGCTCACTCTCTATGGGACAGTGGGAACACACAGCTCAGACCCGCGTTGTGCTGCAGAAACAGTTGGCGAGAGAGGCTCTGCTGGGGCCATTGGAAGGTCATCAAGGGAGACACGCACACCcctgtcataataataaaaagttataataaagattacagaaatcaataaaaagATTCACATATACAACTGACATCGTAGTGCTTTGGCTGAAATACATACAAGAGATCCAAGGTAACTGaacataatgtaaaaaatataagcAGATGTCCAACATCTATTTAGAATTTTGCTAGACGCAAAACCGTAGTAATAACCTACAATTTACAAGAGTTATTATATTAAACTTAGGCTCTGGCAGACAGGGAGTCAAAGTCTTCTAGTTTAGTTACAGacaagtaaaacattttgtaaaagagATGACCCACACCCTAACTTGACTTAAAGTAAGTAGAGAAAACTGTGCAGTAGGGTCAAGGTTTCAACAGCTACTATAAGCAACAGTCATTATCTGCAGCAGTGTGTCACGTGATGTGCCGAGTAGGCATTAATTTCTAGACTCTGTGCTTTGCCTTGTTTTCCTTGACAGACTATTATCTGCTTAAGCTGCACTAATTGTGGATGCTTTATTAAGGAAATTAATGCTCaggtatatttttgtttattgacaAAACTCAGCATTATTATActccatgtttttctttatacagaactcattacaaaaaaaaaaaaacgaagaaattaaataaataaatataaatatatacatacatacataatcaaaCCTTAAACTACTACATCCTCTTAATTCTGTAAACCTACTTGTAATATTACTAATACTGTGACTGTGTTTGCAAAAGCTTAAAATGGAGAATCCTTTTCAAGCATATTTAATAAAGTCACTATCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004356 True 1916 mRNA 0.39 3 44525064 44527659

Neighbor

gene id symbol gene type direction distance location
AMCG00004366 NA coding downstream 16246 44500874 ~ 44508818 (-)
AMCG00004357 NA coding downstream 29302 44487408 ~ 44495762 (-)
AMCG00004349 nectin1,LOC102782356 coding downstream 413939 44102083 ~ 44111125 (-)
AMCG00004350 pvrl1b,LOC107563312,LOC107691861,LOC107758086,LOC107670612,LOC107561861,LOC106581605 coding downstream 433231 44087376 ~ 44091833 (-)
AMCG00004348 nectin1,LOC102782356 coding downstream 477826 44015119 ~ 44047238 (-)
AMCG00004361 NA coding upstream 6905 44534564 ~ 44538108 (-)
AMCG00004365 NA coding upstream 34009 44561668 ~ 44568560 (-)
AMCG00004362 NA coding upstream 48885 44576544 ~ 44586109 (-)
AMCG00004358 NA coding upstream 64018 44591677 ~ 44604309 (-)
AMCG00004360 vps11 coding upstream 78630 44606289 ~ 44617399 (-)
G7609 NA non-coding downstream 4246 44520175 ~ 44520818 (-)
G7587 NA non-coding downstream 116399 44408360 ~ 44408665 (-)
G7585 NA non-coding downstream 188494 44336271 ~ 44336570 (-)
G7583 NA non-coding downstream 347076 44177646 ~ 44177988 (-)
G7580 NA non-coding downstream 435284 44083097 ~ 44089780 (-)
G7684 NA non-coding upstream 105093 44632752 ~ 44633282 (-)
G7704 NA non-coding upstream 269847 44797506 ~ 44879219 (-)
G7714 NA non-coding upstream 611483 45139142 ~ 45143452 (-)
G7744 NA non-coding upstream 1290339 45817998 ~ 45852813 (-)
G7820 NA non-coding upstream 1659847 46187506 ~ 46189689 (-)
G7608 NA other downstream 2851 44520914 ~ 44522213 (-)
AMCG00004336 NA other downstream 1074809 43402953 ~ 43450255 (-)
AMCG00004313 NA other downstream 1994058 42376726 ~ 42531006 (-)
AMCG00004302 NA other downstream 2457400 42064989 ~ 42067664 (-)
G6792 hs90b,hsp90bb,hsp90ab1 other downstream 4675941 39841935 ~ 39849123 (-)
AMCG00004364 NA other upstream 12504 44540163 ~ 44561575 (-)
AMCG00004372 LOC108423781,LOC105921217 other upstream 95531 44623190 ~ 44712051 (-)
G7868 NA other upstream 1779267 46306926 ~ 46307319 (-)
G7882 LOC107575789 other upstream 1940466 46468125 ~ 46468434 (-)
AMCG00004398 anc13,anapc13,LOC107756075,LOC107693524 other upstream 2355633 46883292 ~ 46887754 (-)

Expression


Co-expression Network