AMCG00004361


Basic Information

Item Value
gene id AMCG00004361
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 44534564 ~ 44538108 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004361
CGACACAAACACCACAAGGACTGCAAGAAGTCAAAAACAGCCTTACAGATCGGTTCTGGCTCCGAGAACTGCCTGCTCAGCCACTACAGCTCCAGCTACACCCGGCCCCACAGTAAGACTGTTTACCTGGGTAACACTGTTCTTCGGCCTCACCTCAGACTCTGCAACACTGTGCTGCCATGCTCCGGCCTGCTGCACCATGCAGTCAGTCTGTCTGAGATcacagtCAGCAAGCGCCCTTTCCGCACCCCCCTGCACCCCGCCCCACCCTGCATGGCTCTGCGCACAACCCAGCGCTCCGCCTATCGCCGCCCGCCCCCCAGCACTAGAGCACAGCCTGCACCCAGGCTGGAGAGTGTGTGTGGCTCACTGGAGCCTATTCAGAGCCACTCAGTCTACAGCCTGGACTTCCCAGCAAAGGAGGGGGAGGCGGTTGTAGTGCGGCGCCCCCCCACGAGCCTGCAGAGGCCCCCCCCCGGGGCCCAGCTCAGCCAGCACACCACAGCCCGAGACAGTTACCCAGACCACAGCGGGGTgctgctctctcgctctctccccaGCCTGGGAGAGCTGCCTGCTGTTGTGGgATCTCTGCTCTTCCCTGACCggaaggaggagatgaagaCGATAACGCAGAGTGAGTTCATCTGGAAAACGGGAAGCAAGCCAGAGCTGAGTCAGAGCATCTCCTGCAACCTCAGGGTCGAAGGTGAGCAGGACCTGCTGACGACCCATCACGAGGTGTACTGCGTTCATCCAGTGGAGGGCGCTGTGCCTACACGGAGGCAGCGCCCACCTGAGAAGGAAGAGGCTGTCAGAGCTGACCCGATGGAGTCTCTCACCAAGTACCGCTCCGATTACCCTGCTTATTACGGGCCCCCTAGGAGGAGCCTGCCTGCACGACCCCCCCCTGATAACCTGGTCATCAACCAGGCCCTCCGGAGGGACTTCAGGACGGTGCAGAGGGACACCTACCCTGGCTGGGACGCCTCCAAACACAGACGACCTGACCCTGCCCAGCTAAGGGAGGAGTTGTCTGACTGGGACAAGGACTGCCCCTTCCAAGGCGACACAGTAACCAAgCTGGCGTACCAGCCTCTTCCTTTGAACAGCCTCCAAGCACAGCCCCTGCAGCACCGGGCCCCATGTCTGAAGGTCCAGCCAGGCCTGTTCCACGATACCACCGCCAGCAAGGAGTTCTTTCAGGACTGGGGGGCCCAGCGGCGCCGGCGGTGTGGGGATCCCCATGATGGACTCTACATAAAACCCctgGGGAAGCTGGAGAGCGAGACCACCAGCTCTAGCACCTTCATCCCGAAGAGCACACGGAGGGTGCAGAACTGCAGGCCGGAGCAGAGGCCTGTGCAGGCTGAGGGGGAGCACGACTTCACCACTGTCCACAATGACACCTACAGGCCTCTCAGTCTCCCTGTGTGTCGGCTGCAGCTCTACCTCGCtcacaagcagcagcagcagaagcatCTAGTGCCCCCTGCTGTCCCAACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004361 True 1506 mRNA 0.62 9 44534564 44538108

Neighbor

gene id symbol gene type direction distance location
AMCG00004356 NA coding downstream 6905 44525064 ~ 44527659 (-)
AMCG00004366 NA coding downstream 25746 44500874 ~ 44508818 (-)
AMCG00004357 NA coding downstream 38802 44487408 ~ 44495762 (-)
AMCG00004349 nectin1,LOC102782356 coding downstream 423439 44102083 ~ 44111125 (-)
AMCG00004350 pvrl1b,LOC107563312,LOC107691861,LOC107758086,LOC107670612,LOC107561861,LOC106581605 coding downstream 442731 44087376 ~ 44091833 (-)
AMCG00004365 NA coding upstream 23560 44561668 ~ 44568560 (-)
AMCG00004362 NA coding upstream 38436 44576544 ~ 44586109 (-)
AMCG00004358 NA coding upstream 53569 44591677 ~ 44604309 (-)
AMCG00004360 vps11 coding upstream 68181 44606289 ~ 44617399 (-)
AMCG00004363 NA coding upstream 107176 44645284 ~ 44651272 (-)
G7609 NA non-coding downstream 13746 44520175 ~ 44520818 (-)
G7587 NA non-coding downstream 125899 44408360 ~ 44408665 (-)
G7585 NA non-coding downstream 197994 44336271 ~ 44336570 (-)
G7583 NA non-coding downstream 356576 44177646 ~ 44177988 (-)
G7580 NA non-coding downstream 444784 44083097 ~ 44089780 (-)
G7684 NA non-coding upstream 94644 44632752 ~ 44633282 (-)
G7704 NA non-coding upstream 259398 44797506 ~ 44879219 (-)
G7714 NA non-coding upstream 601034 45139142 ~ 45143452 (-)
G7744 NA non-coding upstream 1279890 45817998 ~ 45852813 (-)
G7820 NA non-coding upstream 1649398 46187506 ~ 46189689 (-)
G7608 NA other downstream 12351 44520914 ~ 44522213 (-)
AMCG00004336 NA other downstream 1084309 43402953 ~ 43450255 (-)
AMCG00004313 NA other downstream 2003558 42376726 ~ 42531006 (-)
AMCG00004302 NA other downstream 2466900 42064989 ~ 42067664 (-)
G6792 hs90b,hsp90bb,hsp90ab1 other downstream 4685441 39841935 ~ 39849123 (-)
AMCG00004364 NA other upstream 2055 44540163 ~ 44561575 (-)
AMCG00004372 LOC108423781,LOC105921217 other upstream 85082 44623190 ~ 44712051 (-)
G7868 NA other upstream 1768818 46306926 ~ 46307319 (-)
G7882 LOC107575789 other upstream 1930017 46468125 ~ 46468434 (-)
AMCG00004398 anc13,anapc13,LOC107756075,LOC107693524 other upstream 2345184 46883292 ~ 46887754 (-)

Expression


Co-expression Network