AMCG00004367 (LOC107691633,LOC105921217,LOC103395053)


Basic Information

Item Value
gene id AMCG00004367
gene name LOC107691633,LOC105921217,LOC103395053
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 44708013 ~ 44711574 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004367
ATGTTACCGGTTTTTGGCCACAGCGGGAATGTGGTGCCTCTTGCATCCGGCAACGGGCGCCTGAGGCACCATGTGTCCTACCTCGTCTCACGCATCATGTCTAAGGGACCAGCAGTGGGTATTGACCTGGGCACCACCTACTCCTGTGTGGGGGTGTTCCAGCATGGCAAAGTGGAGATCATTGCCAACGACCAGGGCAACAGGACCACGCCCAGCTACGTGGCCTTCACAGACTCTGAGCGTCTGATTGGAGATGCTGCCAAGAACCAGGTGGCCATGAACCCCACCAACACAGTGTTCGATGCCAAGCGCTTAATTGGTCGCAGGTTTGATGATGCGGTGGTACAATCGGACATGAAGCACTGGCCATTCAATGTCATCAACGATTCCACCCGTCCCAAGGTCCAGGTCGAGTATAAGGGCGAGTCCAAGTCTTTCTACCCTGAGGAGATTTCCTCCATGGTCCTGGTCAAGATGAAGGAAATTGCAGAGGCCTACCTGGGCAAGACTGTTACCAACGCCGTGGTCACGGTGCCAGCTTACTTCAATGACTCTCAGCGTCAAGCTACTAAAGATGCAGGGACCATCTCAGGGCTGAACGTGCTTCGTATCATCAATGAGCCCACCGCTGCTGCTATTGCCTATGGCTTGGACAAGAAGATTGAGGTCACATTCGACATTGATGCCAACGGCATCATGAATGTCTCCGCTGCTGACAAGAGCACTGGCAAGGAGAACAAGATCACCATCACCAATGACAAAGGTCGCCTGAGTAAGGAGGATATCGAGCGCATGGTCCAGGAGGCTGAGAAGTATAAGGCAGAGGATGACGTCCAGCGTGACAAGGTTTCTTCCAAGAATGCACTGGAGTCCTACGCCTTCAACATGAAGTCCACAGTGGAGGATGAGAAGCTGAAGGGAAAGATCAGTGACGAGGACAAACAGAAGATCCTGGACAAGTGCAATGAGGTCATTGGCTGGCTGGACAAGAACCAGACTGCGGAGAAGGAGGAGTATGAGCACCATCAGAAGGAGCTGGAGAAGGTGTGCAACCCCATCATCACCAAACTGTACCAGAGTGCAGGGGGCATGCCTGGTGGGATGCCTGAGGGAATGCCTGGTGGCTTTCCAGGGGCTGGGGCTGCTtcaggaggaggaggatccTCTGGACCAACCATTGAGGAAGTGGATTAA

Function

NR:

description
PREDICTED: heat shock cognate 71 kDa protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004367 True 1194 mRNA 0.54 7 44708013 44711574

Neighbor

gene id symbol gene type direction distance location
AMCG00004352 NA coding upstream 155880 44549432 ~ 44552133 (+)
AMCG00004353 NA coding upstream 195687 44511847 ~ 44512326 (+)
AMCG00004354 NA coding upstream 209106 44498428 ~ 44498907 (+)
AMCG00004351 NA coding upstream 296962 44410599 ~ 44411051 (+)
AMCG00004346 NA coding upstream 909538 43795221 ~ 43798475 (+)
AMCG00004368 NA coding downstream 2451 44714025 ~ 44732599 (+)
AMCG00004374 NA coding downstream 357341 45068915 ~ 45096943 (+)
AMCG00004375 NA coding downstream 414350 45125924 ~ 45143449 (+)
AMCG00004378 NA coding downstream 590991 45302565 ~ 45307246 (+)
AMCG00004379 NA coding downstream 1110327 45821901 ~ 45859274 (+)
G7662 vps11,LOC107588528,LOC107578557,LOC107691631 non-coding upstream 90614 44616316 ~ 44617399 (+)
G7644 NA non-coding upstream 120029 44587706 ~ 44587984 (+)
G7638 NA non-coding upstream 133016 44574331 ~ 44574997 (+)
G7614 NA non-coding upstream 164870 44530340 ~ 44543143 (+)
G7584 NA non-coding upstream 371332 44336451 ~ 44336681 (+)
G7765 NA non-coding downstream 1207816 45919390 ~ 45921805 (+)
G7879 NA non-coding downstream 1678814 46390388 ~ 46390751 (+)
G7906 NA non-coding downstream 2004204 46715778 ~ 46717255 (+)
G7911 NA non-coding downstream 2010255 46721829 ~ 46723088 (+)
G7949 NA non-coding downstream 2280643 46992217 ~ 46997805 (+)
AMCG00004355 hyou1,LOC100380749 other upstream 67281 44618185 ~ 44640732 (+)
G7329 fabp7,LOC108247051,LOC104945778 other upstream 2016904 42688779 ~ 42691109 (+)
AMCG00004304 NA other upstream 2491651 42210430 ~ 42216362 (+)
G7094 NA other upstream 3200782 41459576 ~ 41507231 (+)
AMCG00004257 dusp10,LOC106607590 other upstream 4366778 40326410 ~ 40341235 (+)
AMCG00004380 NA other downstream 1250436 45962010 ~ 45968306 (+)
G7999 NA other downstream 3435314 48146888 ~ 48147156 (+)
AMCG00004421 NA other downstream 4185543 48897117 ~ 49026355 (+)
G8099 NA other downstream 4220876 48932450 ~ 48934095 (+)
AMCG00004424 NA other downstream 4332016 49043590 ~ 49060055 (+)

Expression


Co-expression Network