AMCG00004369


Basic Information

Item Value
gene id AMCG00004369
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 44675825 ~ 44680666 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004369
tcagtttcagttttcattcagcAGCAAGGAAAGCAACTCGAAAAGTGCTTTGGGTTGGTTAATAGTTTTGTTGAAAAGGTAAACAGATTTGATCTCATATATACTGGTAGACATacacttttctttccttagtaTATAAAGGTACCATTTTAAAAACCAAGATCCTCTGTGAACGTGGGAGTTTGTGAATGGATTACACGTTCAATCTAAGCTCTGTGCTGAAAAATTCGGACTCGGCACAAATGAAGCCATGCATCTTCACCGTGTGGCTCTCCGTGCTCACCTGTGTGGGTTGCACAGACACAGACACCTCAATCAGAGTTGAAAGTGAGCGAGCGGAGGTCTGTGGGGAGCTGGGGAAGTCCGTGCTTCTGTCTGTGAGCTACAACCTGCCCAGGAATAATCTGTTAGATACAGCATGGGAGATGCAAAGCAGCACGTCATACATGAGCATATACCGGGGCTCTAGCACTACGAAAGCCTATCAAGGCAGAGTGGAAGTATTCCCCAACGGCTCCCTGCTGCTGAAAGATCTCAGGTCCTCGGATGAAGCCCGCTACACGTTCAGTGTTGCTCTGAAAAGTGGAGAGGAGCGTGAAGCCACTGTTGATCTCTGCATTGAGGACCGAGTGCAAAACTTGACAATTGAAAAGATTCCTAACCCCTCCGGCTCCGGGCAGAGTGCGAGGCTGGTGTGCAAGGCACCGAAAGCAAGACACCTGCGTGTGCTGTGGCAGGGAGTCAACTCATCCTCCCAGGTCTGGCGCTCCTTCAGGGATTTTGAGGAGGCCGAGGTCATCGTCATGTCCCAGCACTGTGGAGAGCTTGTCTGTGTAGCTGAAAACAATGTGAGCCACCTGGAGATGCGACACAAGCTGAACAGAACATTGGCCACTTGTGAGAATtGTGAGCTGCAGTGCAAcgaaatggaaaaaacaagtgAAGTGAGCACCTTGGCAGTTGCTCTGTCTGTGGGTATCCTAGTCCTGCTGATTGCATCTGCCGTGATACTCTGCATCCGTCGCCACAGAACCAAGTGTGGTAAGAggaaagaggagaaaaaaatggtTGATTCTACACAACAACGTTTACAACAGCCTGGCAAAGACACCAGCACTGGCACGAAACTTGATAATGCCACACAGGAACAGATTGACATGATTTTATAATTCCTAATCTGCATGCATGCTGTTCAGTCAGCCCTCTATATGGAGCAATCTGCCACGTTTTTGTAACGTGTGTATTGTGGGTTGCTCAACAGACTGTTTTATTCTGAAAcactatctatatataaatacatatacatgtatgatACCATAATCCAGTTTTGGATGGATAGGTGATATCCCAGCTTCTACTTTATCCCCAAGACAGACAACAACGAAAACCATCATTCTGAGTATTAcaaggaattaaaaataataatgcacgCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004369 True 1434 mRNA 0.46 6 44675825 44680666

Neighbor

gene id symbol gene type direction distance location
AMCG00004359 NA coding downstream 7629 44657242 ~ 44668196 (-)
AMCG00004363 NA coding downstream 24553 44645284 ~ 44651272 (-)
AMCG00004360 vps11 coding downstream 58426 44606289 ~ 44617399 (-)
AMCG00004358 NA coding downstream 71516 44591677 ~ 44604309 (-)
AMCG00004362 NA coding downstream 89716 44576544 ~ 44586109 (-)
AMCG00004371 LOC106567641,LOC106603659,LOC108277187 coding upstream 3906 44684572 ~ 44692353 (-)
AMCG00004370 NA coding upstream 58004 44738670 ~ 44740860 (-)
AMCG00004373 lim2.1,LOC105900331,LOC107579014 coding upstream 66044 44746710 ~ 44804158 (-)
AMCG00004376 NA coding upstream 494666 45175332 ~ 45187413 (-)
AMCG00004377 NA coding upstream 588518 45269184 ~ 45272999 (-)
G7684 NA non-coding downstream 42543 44632752 ~ 44633282 (-)
G7609 NA non-coding downstream 155007 44520175 ~ 44520818 (-)
G7587 NA non-coding downstream 267160 44408360 ~ 44408665 (-)
G7585 NA non-coding downstream 339255 44336271 ~ 44336570 (-)
G7583 NA non-coding downstream 497837 44177646 ~ 44177988 (-)
G7704 NA non-coding upstream 116840 44797506 ~ 44879219 (-)
G7714 NA non-coding upstream 458476 45139142 ~ 45143452 (-)
G7744 NA non-coding upstream 1137332 45817998 ~ 45852813 (-)
G7820 NA non-coding upstream 1506840 46187506 ~ 46189689 (-)
G7866 NA non-coding upstream 1623440 46304106 ~ 46304371 (-)
AMCG00004364 NA other downstream 114250 44540163 ~ 44561575 (-)
G7608 NA other downstream 153612 44520914 ~ 44522213 (-)
AMCG00004336 NA other downstream 1225570 43402953 ~ 43450255 (-)
AMCG00004313 NA other downstream 2144819 42376726 ~ 42531006 (-)
AMCG00004302 NA other downstream 2608161 42064989 ~ 42067664 (-)
G7868 NA other upstream 1626260 46306926 ~ 46307319 (-)
G7882 LOC107575789 other upstream 1787459 46468125 ~ 46468434 (-)
AMCG00004398 anc13,anapc13,LOC107756075,LOC107693524 other upstream 2202626 46883292 ~ 46887754 (-)
AMCG00004403 cadm1a,LOC107548188,LOC107715321 other upstream 2367458 47048124 ~ 47306589 (-)
AMCG00004412 zbtb16,zbtb16a,LOC107703518 other upstream 3782515 48463181 ~ 48480715 (-)

Expression


Co-expression Network