Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00004440 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 49768277 ~ 49772278 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00004440 | True | 330 | mRNA | 0.65 | 2 | 49768277 | 49772278 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004439 | LOC103368493 | coding | downstream | 15161 | 49746828 ~ 49753116 (-) |
| AMCG00004438 | NA | coding | downstream | 104422 | 49636642 ~ 49663855 (-) |
| AMCG00004436 | NA | coding | downstream | 164930 | 49602154 ~ 49603347 (-) |
| AMCG00004435 | NA | coding | downstream | 179448 | 49582123 ~ 49588829 (-) |
| AMCG00004433 | NA | coding | downstream | 306877 | 49450828 ~ 49461400 (-) |
| AMCG00004444 | NA | coding | upstream | 3646 | 49775924 ~ 49796184 (-) |
| AMCG00004446 | NA | coding | upstream | 48277 | 49820555 ~ 49822910 (-) |
| AMCG00004445 | NA | coding | upstream | 58921 | 49831199 ~ 49833740 (-) |
| AMCG00004447 | NA | coding | upstream | 67257 | 49839535 ~ 49841520 (-) |
| AMCG00004456 | c1qtnf5 | coding | upstream | 269981 | 50042259 ~ 50048074 (-) |
| G8133 | NA | non-coding | downstream | 666365 | 49101708 ~ 49101912 (-) |
| G8118 | NA | non-coding | downstream | 720204 | 48977624 ~ 49048073 (-) |
| G8116 | NA | non-coding | downstream | 811814 | 48955376 ~ 48956463 (-) |
| G7979 | NA | non-coding | downstream | 2081710 | 47685925 ~ 47686567 (-) |
| G7978 | NA | non-coding | downstream | 2082403 | 47685631 ~ 47685874 (-) |
| G8281 | NA | non-coding | upstream | 39100 | 49811378 ~ 49814054 (-) |
| G8286 | NA | non-coding | upstream | 72304 | 49844582 ~ 49858455 (-) |
| G8307 | NA | non-coding | upstream | 172020 | 49944298 ~ 49945808 (-) |
| G8308 | NA | non-coding | upstream | 175605 | 49947883 ~ 49948531 (-) |
| G8309 | NA | non-coding | upstream | 178572 | 49950850 ~ 49951534 (-) |
| AMCG00004429 | NA | other | downstream | 343095 | 49411207 ~ 49425182 (-) |
| AMCG00004420 | NA | other | downstream | 782966 | 48940024 ~ 48985311 (-) |
| AMCG00004412 | zbtb16,zbtb16a,LOC107703518 | other | downstream | 1287562 | 48463181 ~ 48480715 (-) |
| AMCG00004403 | cadm1a,LOC107548188,LOC107715321 | other | downstream | 2461688 | 47048124 ~ 47306589 (-) |
| AMCG00004398 | anc13,anapc13,LOC107756075,LOC107693524 | other | downstream | 2880523 | 46883292 ~ 46887754 (-) |
| G8310 | NA | other | upstream | 176583 | 49948861 ~ 49949592 (-) |
| G8340 | NA | other | upstream | 232854 | 50005132 ~ 50008694 (-) |
| AMCG00004457 | rnf26 | other | upstream | 294120 | 50066398 ~ 50071941 (-) |
| AMCG00004467 | trappc4,LOC106612982,LOC107561742 | other | upstream | 437705 | 50209983 ~ 50225826 (-) |
| G8501 | NA | other | upstream | 898788 | 50671066 ~ 50673375 (-) |
