AMCG00004465


Basic Information

Item Value
gene id AMCG00004465
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 50188692 ~ 50197647 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004465
GCTCTAGACTCAGTGCTTTTCTTTCCTGAGACCCACACACAAACTCCTGCACCCCTCTCAGAATGGCTCGGATCATGCCACTGTCATTAATTCTGCTCTGGTCTACTGTCACAGTCTTGGGCTGCGTTGCATGGGCACAGTGGGCGAGTGATGTTCTCACGGTGTTTGGCATATACGAGGGCTCGGTCAATCTGACGGCAAACATCAATGTCTTTGAGGAGGCGACGCTGGTGCAGTGGAGGGTGAAGAAGGGCCCAGAGAAGATCAGGATCGTGATGTACAACCCTCAGAGTGACTGGCCGCTTCCCCCGGTACTGGGACGGTACGAGAACCGCACCCTGTACTCAGACACCTTCCTTTGGATCAGCAACCTCAGCCTGCAAGACACGGGTGTGTACATTCTCCACGTCACTAACTGGGATGGCCACATAACTAAGAGAATAATCAACCTCATTGTGGAAGTGCCTGCTGCTGTGCCCCGCATTACATGTCAGATGTATAGCCTACCCCCAAATCCTGTCCTGAACCCACTGCTCCCTTGTACTGTCTCCGAGGGAGGGAGCATTTCCCTCTGCTGCTCAGCCTCCCAGGGGACCAACCTCCGATTCCATTGGTACAAAGATGGAGGCCCCCTCTTTCACACTGGGAACCTGTCCTTGGTCAACCTGAACAGATCGAACTGTGGGGAGTATACCTGTGTGGTCAGCAATGCTGTGAGCCGAGTGGAAACAGCCTTCAGTTTCTGGGATTTCTCCCTTTGTGCTTCAGAAAATAGATTTTGGAAAACGCAGAGTAATATTTTTGCCCCAATTGTGgcctttcttctctttctcctcaTTGTCATTGCTGTCATCGTCAGACGCAAGATGATGTGTCACAACGGGGATAAGAGTGCTACAGTACCAGCTGACACCATATATGAGCCAATGTATCCAAGTCTGAGGAGACCAGCTAAAGGCCAGCTTAGCCCACAACTGCAGGATCCAGTTTCAGTGGCAAGGAGAACTGACTCGCGCAGGACACCCATGGAAAACcgaaaacaagacaaacagctGGGGAGTTCggaaaaataattttgaatcaAAACATTGGAATGATGGAACTTTGTACATTTTAAGtctatttaattgtttttcttgctcAGTGACATCCTTTTTCTTAGCAGTGTGGCAcaaaggaaatgtaatgtatttttcctccAACAAACGTAACTTTAACTGATGCAGTTTAGATGGATTAAGTGATGAGAATATTCAGATTTTTATCTAGGTCAAAAAATGTGTCAAAGAGCCGGAAAGTAGTAATCAGTACAAATGTTAATTCTGGTAAACTTGTGGTTGAAAATACACAGTGGCTTTAGCTGGCCATCAGTTTGTAATTTGACAATTGTACTGCCCCTTGTTTGTTATTAACTTTCAGGTACTTTCCAAGTACCTAAATCAGTCTTTTTTACCTACtggcattttattgtttaaatataatatatccaTAATTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004465 True 1497 mRNA 0.46 5 50188692 50197647

Neighbor

gene id symbol gene type direction distance location
AMCG00004461 cbl,LOC102793573 coding downstream 6636 50170076 ~ 50182056 (-)
AMCG00004460 cbl coding downstream 30947 50144710 ~ 50157745 (-)
AMCG00004456 c1qtnf5 coding downstream 140618 50042259 ~ 50048074 (-)
AMCG00004447 NA coding downstream 347172 49839535 ~ 49841520 (-)
AMCG00004445 NA coding downstream 354952 49831199 ~ 49833740 (-)
AMCG00004466 NA coding upstream 33627 50231274 ~ 50234343 (-)
AMCG00004470 NA coding upstream 84098 50281745 ~ 50285988 (-)
AMCG00004471 NA coding upstream 92295 50289942 ~ 50290739 (-)
AMCG00004475 NA coding upstream 442539 50640186 ~ 50660336 (-)
AMCG00004483 kcnj5,LOC107725067,LOC107709561,LOC107558569,LOC106581095 coding upstream 618075 50815722 ~ 50838107 (-)
G8370 NA non-coding downstream 52961 50127772 ~ 50135731 (-)
G8350 NA non-coding downstream 150337 50033396 ~ 50038355 (-)
G8347 NA non-coding downstream 168668 50019824 ~ 50020024 (-)
G8346 NA non-coding downstream 172907 50015539 ~ 50015785 (-)
G8345 NA non-coding downstream 173940 50014390 ~ 50014752 (-)
G8500 NA non-coding upstream 471299 50668946 ~ 50674553 (-)
G8505 NA non-coding upstream 483983 50681630 ~ 50681962 (-)
G8524 NA non-coding upstream 496927 50694574 ~ 50694803 (-)
G8541 NA non-coding upstream 523532 50721179 ~ 50722312 (-)
G8550 NA non-coding upstream 551371 50749018 ~ 50752724 (-)
AMCG00004457 rnf26 other downstream 116751 50066398 ~ 50071941 (-)
G8340 NA other downstream 179998 50005132 ~ 50008694 (-)
G8310 NA other downstream 239100 49948861 ~ 49949592 (-)
AMCG00004429 NA other downstream 763510 49411207 ~ 49425182 (-)
AMCG00004420 NA other downstream 1203381 48940024 ~ 48985311 (-)
AMCG00004467 trappc4,LOC106612982,LOC107561742 other upstream 12336 50209983 ~ 50225826 (-)
G8501 NA other upstream 473419 50671066 ~ 50673375 (-)
AMCG00004480 LOC107565095,LOC104942062,LOC107576893 other upstream 513192 50710839 ~ 50720925 (-)
G8542 foxred1 other upstream 526220 50723867 ~ 50725353 (-)
AMCG00004481 NA other upstream 533316 50730963 ~ 50738516 (-)

Expression


Co-expression Network