AMCG00004466


Basic Information

Item Value
gene id AMCG00004466
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 50231274 ~ 50234343 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004466
GTCGCTCACAGGGAGTATCATTTTGACACAGTAGCGTACAAGATCTGAATGAAATGCGGACCTTACGCCTTGTGATCTTTGGGCTGCTTTTGGTCGCAGCAAATGCAGATTTCCAGGCTAGTGTTCTGGACGGGTCTGGCGGCCTGCTGACGGGAGTGTTTGCCAACTCGGTGGTGCTCAGTCTGCCACCCTGCACCCTCGCTGGGCAGGACGTAAACATCGAGTATTTCAATGTCCCAGCGGGCAACAAGACCCTTCTCACCAACTTATTCACTGTCCCTTTGTGTCGGTACAAGAGGGATCTCATCTCAGTCAATGAGAACAATGGGCAGTTCGTTGTCAGCAGAACCATTGGATACCAGGTGAAGAACCTCGTTCCTGGGATTGACTACAgGTTCCAGTATAATGTTGGGAGTGAGAGGAGCAATGTTGTTGAGGTCACTACTAGAGCAGGCAAGGACTACAATACCATCGACGATGGGCTGCCGGGTCGCAGTGCAGCCATGTTGGTGATCACTGTGCTGCTGTCCGTCGCCATGTTCGTCCTGATCGCTGGCATGATTGCAGCCCTCTTCATTGCACATCGGAAGTGAGGAACCAGCCCCAGCAGCTCCGGGGAGAAGCAGACCAGTGGACAGTCCATTTCCATAACccttcagtaaatatatataaactaatgtCCTACCTACATAATGAAAGTGTTGAGCCAAACTGACTCAAACTTCTTGCAGCTTAAacattctttttacattttatgttttgctgtttCAATGTGTTTGACTGTCTTTTTGCAGAATGCTTATTCTGCGTAGTTCTGTGGAAAATTTCAAGAAAGAAATCTATTATTtgagaatacatttttggtCCATGATTATCttaggttttaaaaaaatgtatttattatttgcactCTTTAAATCTTGCTGTAGAATATTGAATGTCAAAGTGTTGAATAGTGGGTTGCACTGCTTGTCCTTTGTTAATATTCTGTTACTATTCTGTATCACgtggacaaaatacaaatgacatCTTCATTGGGTTTACTGCACTTGTTATgctaactaaatacataaataattatttgtttcattttgaaaaatgtatattaaaaacaatcttttcacattttactaCTTTGTCTTCATGAACAATTCCTAATGGTTTTATGTTAGTAGCACAtgatatataattgtttatgaGAAAAATAAGGGAAGCTTACATAAAACTCTGTTACACATGTCACCCTTTTTAATCATTAATGCTGCAACTCCTCAGTATATGAGATATAAAAATTGTCCATCTAGGGCTTtagatctatttttatttaatgtatttaatgccaAAGAACTAATTTTGAGCTGCTCTACAGTATATATAGAGATCGCTCATACAAAGAACAGAAGATCGTATGTTGGGCACTTCAGGTTTGTATATAAAGAATTTGGGTGGATCTGGTAAGAGCGAATCCAGAGAGTTAGACAGAATTTATTAAATTTCCTCCCCTTTTGCCAAGTCCATTAATGCTTTACTCattcaattaattcagtttgtacattttcttatgttcttatacacaaaatgacaaatgtcAATCCCACCtcctttaattgaaattaattatacTTTCCCACAGACATTCCCCAAAGGTTTGAAatgttatcttttattttatccaTTTGTATTGCTAActttactgaattacaaatgtttatgttttatgtgtgtgtgatgcaataaataatacaaaataaatcataatgagCACAGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004466 True 1770 mRNA 0.38 5 50231274 50234343

Neighbor

gene id symbol gene type direction distance location
AMCG00004465 NA coding downstream 33627 50188692 ~ 50197647 (-)
AMCG00004461 cbl,LOC102793573 coding downstream 49218 50170076 ~ 50182056 (-)
AMCG00004460 cbl coding downstream 73529 50144710 ~ 50157745 (-)
AMCG00004456 c1qtnf5 coding downstream 183200 50042259 ~ 50048074 (-)
AMCG00004447 NA coding downstream 389754 49839535 ~ 49841520 (-)
AMCG00004470 NA coding upstream 47402 50281745 ~ 50285988 (-)
AMCG00004471 NA coding upstream 55599 50289942 ~ 50290739 (-)
AMCG00004475 NA coding upstream 405843 50640186 ~ 50660336 (-)
AMCG00004483 kcnj5,LOC107725067,LOC107709561,LOC107558569,LOC106581095 coding upstream 581379 50815722 ~ 50838107 (-)
AMCG00004484 fli1,LOC106612965,LOC103145351 coding upstream 623603 50857946 ~ 50878635 (-)
G8370 NA non-coding downstream 95543 50127772 ~ 50135731 (-)
G8350 NA non-coding downstream 192919 50033396 ~ 50038355 (-)
G8347 NA non-coding downstream 211250 50019824 ~ 50020024 (-)
G8346 NA non-coding downstream 215489 50015539 ~ 50015785 (-)
G8345 NA non-coding downstream 216522 50014390 ~ 50014752 (-)
G8500 NA non-coding upstream 434603 50668946 ~ 50674553 (-)
G8505 NA non-coding upstream 447287 50681630 ~ 50681962 (-)
G8524 NA non-coding upstream 460231 50694574 ~ 50694803 (-)
G8541 NA non-coding upstream 486836 50721179 ~ 50722312 (-)
G8550 NA non-coding upstream 514675 50749018 ~ 50752724 (-)
AMCG00004467 trappc4,LOC106612982,LOC107561742 other downstream 5448 50209983 ~ 50225826 (-)
AMCG00004457 rnf26 other downstream 159333 50066398 ~ 50071941 (-)
G8340 NA other downstream 222580 50005132 ~ 50008694 (-)
G8310 NA other downstream 281682 49948861 ~ 49949592 (-)
AMCG00004429 NA other downstream 806092 49411207 ~ 49425182 (-)
G8501 NA other upstream 436723 50671066 ~ 50673375 (-)
AMCG00004480 LOC107565095,LOC104942062,LOC107576893 other upstream 476496 50710839 ~ 50720925 (-)
G8542 foxred1 other upstream 489524 50723867 ~ 50725353 (-)
AMCG00004481 NA other upstream 496620 50730963 ~ 50738516 (-)
AMCG00004505 NA other upstream 1708350 51942693 ~ 51954532 (-)

Expression


Co-expression Network