AMCG00004471


Basic Information

Item Value
gene id AMCG00004471
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 50289942 ~ 50290739 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004471
ATGAGGGGCACAGGACCCGTATCTTTCAGCATCCACCCTCGCTACAAGCAGGACGTGGCGCACAGACTGACCCTGGGGGCTCGAGCCGTGGCCTACGGGGAGAAGGGGGTCTCCTTCCAGGGACCTTTTCCACAAGCTATTAGGCTTCAAGGGAAATATATCAACATCACCTACAGTGAAGAGGTTTCGGTCACCAAGTCCAACACTACCTTCGAAGTGTGCTGCAGCTCCTCACAGAGAGACCCCTGCAATGCCAGCTCTGCGTGGGATCCAGCTCCGATTGTTGAGACCAGCAGCAATGTTGTAGTGCTGTCCACAGACGGCTGCTCTGATGAGGTGGCTGCCCTGCGCTATGCCTGGAGGGACTGGCCGTGTGGGTTCAAGGCCTGTCCGGTCTACAGTGCTGACCACGTGCTGCCTGCTGCCCCCTTCATTGTTAAACGGGCACCATAA

Function

GO:

id name namespace
GO:0004055 argininosuccinate synthase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004471 True 453 mRNA 0.57 2 50289942 50290739

Neighbor

gene id symbol gene type direction distance location
AMCG00004470 NA coding downstream 3954 50281745 ~ 50285988 (-)
AMCG00004466 NA coding downstream 55599 50231274 ~ 50234343 (-)
AMCG00004465 NA coding downstream 92295 50188692 ~ 50197647 (-)
AMCG00004461 cbl,LOC102793573 coding downstream 107886 50170076 ~ 50182056 (-)
AMCG00004460 cbl coding downstream 132197 50144710 ~ 50157745 (-)
AMCG00004475 NA coding upstream 349447 50640186 ~ 50660336 (-)
AMCG00004483 kcnj5,LOC107725067,LOC107709561,LOC107558569,LOC106581095 coding upstream 524983 50815722 ~ 50838107 (-)
AMCG00004484 fli1,LOC106612965,LOC103145351 coding upstream 567207 50857946 ~ 50878635 (-)
AMCG00004487 LOC100136491 coding upstream 730599 51021338 ~ 51025994 (-)
AMCG00004492 NA coding upstream 1188051 51478790 ~ 51484432 (-)
G8370 NA non-coding downstream 154211 50127772 ~ 50135731 (-)
G8350 NA non-coding downstream 251587 50033396 ~ 50038355 (-)
G8347 NA non-coding downstream 269918 50019824 ~ 50020024 (-)
G8346 NA non-coding downstream 274157 50015539 ~ 50015785 (-)
G8345 NA non-coding downstream 275190 50014390 ~ 50014752 (-)
G8500 NA non-coding upstream 378207 50668946 ~ 50674553 (-)
G8505 NA non-coding upstream 390891 50681630 ~ 50681962 (-)
G8524 NA non-coding upstream 403835 50694574 ~ 50694803 (-)
G8541 NA non-coding upstream 430440 50721179 ~ 50722312 (-)
G8550 NA non-coding upstream 458279 50749018 ~ 50752724 (-)
AMCG00004467 trappc4,LOC106612982,LOC107561742 other downstream 64116 50209983 ~ 50225826 (-)
AMCG00004457 rnf26 other downstream 218001 50066398 ~ 50071941 (-)
G8340 NA other downstream 281248 50005132 ~ 50008694 (-)
G8310 NA other downstream 340350 49948861 ~ 49949592 (-)
AMCG00004429 NA other downstream 864760 49411207 ~ 49425182 (-)
G8501 NA other upstream 380327 50671066 ~ 50673375 (-)
AMCG00004480 LOC107565095,LOC104942062,LOC107576893 other upstream 420100 50710839 ~ 50720925 (-)
G8542 foxred1 other upstream 433128 50723867 ~ 50725353 (-)
AMCG00004481 NA other upstream 440224 50730963 ~ 50738516 (-)
AMCG00004505 NA other upstream 1651954 51942693 ~ 51954532 (-)

Expression


Co-expression Network