AMCG00004491 (LOC100195238)


Basic Information

Item Value
gene id AMCG00004491
gene name LOC100195238
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 51504468 ~ 51508828 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004491
ATGGGGATATCCGAGGAAGCCGACCGGACACTGTTCGTGGGGAATTTGGACCCGAGAGTGACAGAAGAGATTTTATTCGAGTTGTTTTTACAGGCCGGCCCCATGATCAAAGTGAAAATACCAAAGGATAAGGATGGAAAAGCCAAGCAGTTTGCCTTCGTGAATTTCAAGCATGAGGTGTCGGTGCCCTATGGGATGAGTCTGCTCAACGGGACCCGGCTGTTCGGGAGACCCCTGAAAATCCAATTCAGATCAGGGAGCAGCCATGGGAACACGGATGCCAACAGCCCAGCCCAGTCTCCGGTCCCCAGCCCCTCCGGCGCGCCCTCCGCACACGCGGGCAGGTTCGACCGGGCCGCCGATCTCATGAGCCCCCTCATCGGCTCCCCCCCAGCCCTGATGCAGAGGTCCTTATCCTCCCCAGAAAGTCTGCAGAGACAGGTCATGGCAGCCGGTCTGTGCTGTGTTATTCTCTGcatgtttgtgaaatgtgtgtatactgtgtatCGGCTCGGAAATAAACCAGCCTCATCGTCGCCTGTCCCCGTTTCTCAGATGAACAACGTCTGGCAGATGCAGCAGCTGAACGGCGCGGCCCTGACGTCCGGGTTCCAGCAGCAGAGCTCCCCGCATTACCGGCAGGGCAGCCCCGGCTACGGTGGCGGCTGGCAGCAGGAGGCACCCCCCCAGCGCGGCCAGAGGCACCACCAGGACGCCGGGCACTACAGCCGTGAGCATCGGGGCCCGGAGCGGGGCGTGGACCCGGGCTCCGAGCGGCACTTCAGGGCCCAGCGCGATGGCTACTACCACCAGGACGAGCGCGGGGGCGGCCGCAGCAGCAGGGACAACATAGACCGGCGCCGGGACTCGTCCAGGGATGGCAGGTGGCGTCCGCACAAATACTGA

Function

NR:

description
RNA-binding protein 7

GO: NA

KEGG:

id description
K13188 RBM7; RNA-binding protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004491 True 906 mRNA 0.62 5 51504468 51508828

Neighbor

gene id symbol gene type direction distance location
AMCG00004492 NA coding downstream 20036 51478790 ~ 51484432 (-)
AMCG00004487 LOC100136491 coding downstream 478474 51021338 ~ 51025994 (-)
AMCG00004484 fli1,LOC106612965,LOC103145351 coding downstream 625833 50857946 ~ 50878635 (-)
AMCG00004483 kcnj5,LOC107725067,LOC107709561,LOC107558569,LOC106581095 coding downstream 666361 50815722 ~ 50838107 (-)
AMCG00004475 NA coding downstream 844132 50640186 ~ 50660336 (-)
AMCG00004493 NA coding upstream 12028 51520856 ~ 51527595 (-)
AMCG00004497 NA coding upstream 308383 51817211 ~ 51832339 (-)
AMCG00004503 NA coding upstream 348030 51856858 ~ 51868538 (-)
AMCG00004502 NA coding upstream 361215 51870043 ~ 51918899 (-)
AMCG00004517 NA coding upstream 703802 52212630 ~ 52222193 (-)
G8601 NA non-coding downstream 493325 51010818 ~ 51011143 (-)
G8552 NA non-coding downstream 747742 50755393 ~ 50756726 (-)
G8550 NA non-coding downstream 751744 50749018 ~ 50752724 (-)
G8541 NA non-coding downstream 782156 50721179 ~ 50722312 (-)
G8524 NA non-coding downstream 809665 50694574 ~ 50694803 (-)
G8707 NA non-coding upstream 338084 51846912 ~ 51880156 (-)
G8758 NA non-coding upstream 549908 52058736 ~ 52059501 (-)
G8759 NA non-coding upstream 554576 52063404 ~ 52065450 (-)
G8765 NA non-coding upstream 582041 52090869 ~ 52091247 (-)
G8769 NA non-coding upstream 608052 52116880 ~ 52163082 (-)
AMCG00004481 NA other downstream 765952 50730963 ~ 50738516 (-)
G8542 foxred1 other downstream 779115 50723867 ~ 50725353 (-)
AMCG00004480 LOC107565095,LOC104942062,LOC107576893 other downstream 783543 50710839 ~ 50720925 (-)
G8501 NA other downstream 831093 50671066 ~ 50673375 (-)
AMCG00004467 trappc4,LOC106612982,LOC107561742 other downstream 1278642 50209983 ~ 50225826 (-)
AMCG00004505 NA other upstream 433865 51942693 ~ 51954532 (-)
G8760 NA other upstream 556698 52065526 ~ 52065882 (-)
G8761 NA other upstream 559225 52068053 ~ 52071586 (-)
AMCG00004529 bco2 other upstream 1341655 52850483 ~ 52874108 (-)
AMCG00004533 NA other upstream 1389931 52898759 ~ 52911752 (-)

Expression


Co-expression Network