AMCG00004493


Basic Information

Item Value
gene id AMCG00004493
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 51520856 ~ 51527595 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004493
GCCCCACCAGGTGGGTGGAATTACAAATGACTGCCGGAGATGGAGAGCAGACCCTCACTTAAATCCCAGTGACGCCACTCCCTAATACCCCTTGTGCTCCTCACTATCCGTAGATATAATAAACAAGGATTATAACCTGAAGAAAACAGTACTACTGACACTGAGGCAGCCTGCAATCACGCTGAACACTGCTGCTCCTGAGCTTTCCAACTTTCAATACGAGTGAAACACCACTAAGAGcgttttaattgaattgaaaatgacaGAGCAGGTCTTGTTGTCGTTCGCAGTTCTGCTGAGTGTGCTGACCGTGTGCGCCCAGACGGAGATGAAGAGGGTGGTGGGAGACAATGCCACCCTGCCCTGCCACCATCAGCTGTGGCAGATGGACACCAAAGCGCTGGACGTGGAGTGGTTGCTGCAGAAGCCTGGCTTGAAGCAGCAGACTGCGGTGATCACGTATTCAGGGAGCTCTGTCTACACCAACATGAACGAGGACCAGAAGGACCGGGTGTCGTTTGCTGCAGACTACCTGAAGGGGGACGCCTCTCTCCTGATCAGGGACCTCCTGCTCACGGACTCTGGAGAATACAGCTGCAAGGTCAAGAATGTGGGGCAGTATCAGTGGAGCATCGTCAACCTGATAGTCTTAGTCAAGCCATCGAAACCTAGGTGTTGGAAGGAGGGAAATCTGCAGGTCGGCAGTACTGTGAAAATGAGTTGCAAGTCCTCTGATGGATCCGATCCCATTATTTACAAATGGGAGAGAGTGCTGGACAAAGGCAAGACTGTGGGCAAGCTTCCTCTGCAGGCATATTTCGATAAGAAGAACCCTGAGATCATCACTCTGTCAAACCTGACTCAGGAGAGTACGGGCACATACAAGTGTACAGCCAGCAATGATGTAGGGGCAGAGAACTGCATCATTGAGATCACCATCAATTATGTCCGAGGAGTTGGGGTGGTTGCTGGAGCAGTGGTAGGGGTGGCCTTCGGAGTGCTTCTCATCTTATTCATCATCTGGTTGGTCTTCCacaagaaggagaagaagaagtaCGAGGAGGAAGAAACTCCAAATGAAATAAGCTCTCGCTCAGGGGCCTCCTCGACACAGTCAATGGTCCACAGCAGCGCCCCCCGCGGCCACCGCCCACGCCCTGTCACCACACTGAAAGAGAACGGACAGCCTCCCACCTTCACCCCGTCCCCACCCACCTACACCCAGGTCATCACGAAGGAGACAGAGCCCGACAACACCAAGCTCAGCCCTGGAAACCTGACCAGGATGGGGGCCACGCCTGTCATGATTCCTGCCCAGACCAAGGCCTTTCAGACTGTCTAG

Function

GO: NA

KEGG:

id description
K06789 ASAM, CLMP; adipocyte-specific adhesion molecule

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004493 True 1342 mRNA 0.53 6 51520856 51527595

Neighbor

gene id symbol gene type direction distance location
AMCG00004491 LOC100195238 coding downstream 12028 51504468 ~ 51508828 (-)
AMCG00004492 NA coding downstream 36424 51478790 ~ 51484432 (-)
AMCG00004487 LOC100136491 coding downstream 494862 51021338 ~ 51025994 (-)
AMCG00004484 fli1,LOC106612965,LOC103145351 coding downstream 642221 50857946 ~ 50878635 (-)
AMCG00004483 kcnj5,LOC107725067,LOC107709561,LOC107558569,LOC106581095 coding downstream 682749 50815722 ~ 50838107 (-)
AMCG00004497 NA coding upstream 289616 51817211 ~ 51832339 (-)
AMCG00004503 NA coding upstream 329263 51856858 ~ 51868538 (-)
AMCG00004502 NA coding upstream 342448 51870043 ~ 51918899 (-)
AMCG00004517 NA coding upstream 685035 52212630 ~ 52222193 (-)
AMCG00004519 tomm40l,si:dkey-71l1.1,LOC103030645,LOC107691796,LOC107603199,LOC107574698,LOC107745123,LOC107663776 coding upstream 700025 52227620 ~ 52232504 (-)
G8601 NA non-coding downstream 509713 51010818 ~ 51011143 (-)
G8552 NA non-coding downstream 764130 50755393 ~ 50756726 (-)
G8550 NA non-coding downstream 768132 50749018 ~ 50752724 (-)
G8541 NA non-coding downstream 798544 50721179 ~ 50722312 (-)
G8524 NA non-coding downstream 826053 50694574 ~ 50694803 (-)
G8707 NA non-coding upstream 319317 51846912 ~ 51880156 (-)
G8758 NA non-coding upstream 531141 52058736 ~ 52059501 (-)
G8759 NA non-coding upstream 535809 52063404 ~ 52065450 (-)
G8765 NA non-coding upstream 563274 52090869 ~ 52091247 (-)
G8769 NA non-coding upstream 589285 52116880 ~ 52163082 (-)
AMCG00004481 NA other downstream 782340 50730963 ~ 50738516 (-)
G8542 foxred1 other downstream 795503 50723867 ~ 50725353 (-)
AMCG00004480 LOC107565095,LOC104942062,LOC107576893 other downstream 799931 50710839 ~ 50720925 (-)
G8501 NA other downstream 847481 50671066 ~ 50673375 (-)
AMCG00004467 trappc4,LOC106612982,LOC107561742 other downstream 1295030 50209983 ~ 50225826 (-)
AMCG00004505 NA other upstream 415098 51942693 ~ 51954532 (-)
G8760 NA other upstream 537931 52065526 ~ 52065882 (-)
G8761 NA other upstream 540458 52068053 ~ 52071586 (-)
AMCG00004529 bco2 other upstream 1322888 52850483 ~ 52874108 (-)
AMCG00004533 NA other upstream 1371164 52898759 ~ 52911752 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_002360 BX927333.1 coding NC_007121.7 CM002894.2 39952995 ~ 40113996 (+)