AMCG00004503


Basic Information

Item Value
gene id AMCG00004503
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 51856858 ~ 51868538 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004503
ATGAGACCGCAGCCTGGCGCCGGCTCACCCAGCCACTGCGAGCCCTGCAGGGCCGGGACTTACTGCCCTGACCCCGGCCACACCGGCCAGCCCAATATCCAAGGCAAACCCTGCCGCGCCTCCTACCAGTGCCCCGAAGgCTCTGTGACGGAGACGCTGTGTGTGGCAGGATCATACTGCGGCCCCCAGACtggcacccccaccccctgcccagGTGGCTATCTCTGCCCCGAGGGCTCACACACCTACAGCACCCCAAAGCAGATGTGCCCTTTTCCCTACTACTGCCCCGCCAACATCTCTGCCATGCTGCCCTGCGACGGGGGGTTCATGCCAGTCAATGTGAGCGGCCGACGAGACTCGCGGGAGCGTAGCTGTCTGCGCTGTGAGGCGGGCACCTATCGGCCTGGTGTGGCCACGGAGCTGCGCTGTATGACCTGCCCCCCTGGATACCACTGTCCTGCGGGCACAGAGACCTACTTGCGAAACCCATGTTCTGCAGGATATTACTGCCCACCGGGGTCACCGCTGCCTGTGCCCTGCCCTCCCGGTACCTATGGCAAGAGCAGCCACGCAAAGCATCTTGGGGATTGCTACCCGTGCCCCGCTGGCACCTTCAATCACCTGTTTTCCCAGATGGCCTGCTTCCCCTGCGGCAGCTCGTCCTTCTCGCTGGCAGGCTTCATCTTCTTCAACGAGCTGGACCAGAAGAGCTCCACCAGTGACAGCGACCTGGATTGCCAGCCAGAGGTGAATGAGCGCTGTGGTTCCGGGGAGGTGCGGCTGGCCTGGTCTCGGGAGTGTGTCCCCCCCACAGGACACATCTGTAACCTCACCTGTGGGCAGGAAGGGGGCACCCTCAACGTGGAGCTGGGCATATGCCACTGTAAGACATATGTCTCGGCTGAAGAGCTCTGTGACAGTTCCTGTTTGTCAGGCGTGCCCCAGATTTCTGCCGGCTTTGGATCCAACGGGCAGCTAGTTTTGAACATCAAAGACAGGCAAGAAAGAAGCGTCTGGAGCAGGCCTGTGCCAGATGTTCTTGGCCCTGACACTCATGTCCAGGCCAGCGGCAGTGTCCACTTTGTCCAGTTTGACCCAAATGGCCTGTTTGGATGGATTTTGACTGACAGGAATCTAattgacacatttatttcagCACCGAGTGAAGTGCCAGACTCCCCAGACGGCCTGTCCAGGACAAGGCGGGAGTCCAATGAAGTTGCACAGCTTCCCAGTGCCGGCTCGCTGTCTCGCATTCCCAATCCCATCGCCTGCCTGCGACCCAACGACATGCTTCTCTTCCAGTGCTCGATCAACCACAATAATCGTAGTCAAAGTCACTTCCCAGTTTACCAGAAGGATCACCTCTTCAGCAGCAACCCCGGCTGGGATTTCGGTGCTTTCCGGCAACTTGAGCACCTGATCAAGGAAAGCCATTTCAACCTCTCTAGGTTTGCCCACGTGTTCTCTGAACCGGGGAAGTATGTGTTCCTGGACAACACGGTGCCCGAATGGAGTCTCATCGTGGTGGTCACGGAGCTCGGCACTGACTGCGACCCCCGGGCTGCAGTGTTTCAACCCTCCTCTCCGGTCCAGCTGGTCAGACATGGCATTCTCAAGCAGCACCGCCTCAACCTGCTGCCCGATTGGGGCGCCATTGCAGGTGTGCTGGGGTTCCTGCTCCTGGTGATCACGGTGCTGACCACGTCTGCCCTCATCCTGAAGCCTGTGCACTCCGGCCTGAGCCCCCTGAGCAGACTCAAACCCAAGTGGCGCAGCCTGGGAGAGCCCCGCGTCCCGGCCAGCTACATCTACACTGGCGGAGGATGGGAAGGCACCGAGGGACCTGGAtgcaggggagagggagaaggggcgGAAGCTGAGGAACCAGCCATCTCCAAAGGAGGGACGAGGACAGGGACAGTGGAGCTGGAGGAGTTCAATGTGAGGACGCTGTATGATAAACTGGAGGACCAGACCCTGCACCTGGCCTCCCAGCTCTCCAAGCACCGCAGTGACACCCAGGAGTTCTACAGGAACATCTGCCGGCAGATTGACACGCTGAAGGATGTGGTGGAGCACCTGGACTCCACGAAGCTGAAGCAGCTGGGGAAGATGCTCCAGATGGACCCCGCCGTCACTGAAGATGCCTGGTTTGGAGACTGTGCAAAGCTGGCTAACCAGATCAACACAGAGCCCAAGAGACAACTTTTAAGAGACTCCTCTCTGCAGTTGCTTGAGGCTGTGCTGAGAGCTCTGGAGGGAATGGCCTTCAGATTGGACAACGAGAACATGGTGCTTCACCAGATGATAGCAGAGCAGGGTGAGGCCATGATGAATGAGAGTGGGCCTGACTACAGATATGAACAGGGTTTCCACGGCTCCTCAAAACATTGGTCTCCAGGTCTAGCTGATCTTAAAGGGGCTTCTGATACACAACCTCTACACTCTGATTCAGTGGGTCTCCAGAGCACAGCCCCCTGTCTGAGTGAGAAGGACCTGTGTGATCTGATCGCTTTGACGCCGCTCTCTCGAACTCTGCGTCAGATCCAGGAGTCCCTGCAGAGCCTGCCGACCGCAGAGACAGATGGACTTGCCAATGATGTGCCGGTCGAAGAGACAGTGGGAGATCTGCTGCCTGTGGATCTTTGGGACCTCTCTCCCCAGCACTTTGCCATCTTCCTGTTCGGATGTCACACGTTGCGCCTGCTGCGCAACACTGGCAGCTTCCCCCATGTCACACTGCTCATAGCACACACCGTTCCCGTCCGAGCGCAGGGCTGCTCTGGGGTCAGGGAGTATTGCTTCAGAGACTTCTATTACGACAGATCTAACCAGATCCTGTACCTCCACAAGACCAAGCTGGGCAACGTCGGAGAATTCATCTCCACCATCCTACACTCCATGGCCTGTATTGCTTCAGGCACCATCCCGCATGACTTCATCAAAGCCTTCCACCAGGCTGTCTCCACAGTGGGGGCGGCACTGTTTATCGCTCACTCCAGCAGCAGGACAGAGGATGCCCACAAACCGAACAAGGCAATCGAAAACCGACGCAGAGCAATGCCTACCTTTGTCGAGGATTTTCTTGCCATGAAGGTTCCCCCTGACCCATGCTTCACAGAGGACTGTCTGGCAGAAAGGCTTAAAAGCTTCAAGGGATTCCTACTGCATCAACACCTTCAAGAAATCAAGCGAAATACAAAGGAGACCAGAGCGATGCTTGTCGAGCAGGAGGTCGACCGACTGAATGAGGTGTTTCTGCAGCTCACCACTCAGCTCCAGAAACAGGAAGAGCACAGAAGGCTGCTGGAGCGCCAGCTGCCCGGTCACGAGGGCCCCTCACAGGGAGATGTGCAAGATGTTTTCAATGCCCTTGGTGCCAGCCGGAGTGAGACCCTGATGTTGAAGCTGAAGAGACGCTGCCTGTGTCAGCGGCTGGAGGAGATTTCCAGCAGCCTGTCAGAGATCACCGTCTCTCCGCAGGACTGTTAGCAAACCTCCGACACCCACTTCAGTGTCAACGATTGACTGGATGATTGTTCTGTACAGTAAATGCTTTCTTTTAACGCTTCACCTGGATATTTATAGAACATCTCTTGAACATTTCACATCCAGCCAATCCGAGTTTAAAATCGTTATGCGTTATGTTTtcccacaataaataaacatgattttaaaatgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004503 True 3689 mRNA 0.57 24 51856858 51868538

Neighbor

gene id symbol gene type direction distance location
AMCG00004497 NA coding downstream 24519 51817211 ~ 51832339 (-)
AMCG00004493 NA coding downstream 329263 51520856 ~ 51527595 (-)
AMCG00004491 LOC100195238 coding downstream 348030 51504468 ~ 51508828 (-)
AMCG00004492 NA coding downstream 372426 51478790 ~ 51484432 (-)
AMCG00004487 LOC100136491 coding downstream 830864 51021338 ~ 51025994 (-)
AMCG00004502 NA coding upstream 1505 51870043 ~ 51918899 (-)
AMCG00004517 NA coding upstream 344092 52212630 ~ 52222193 (-)
AMCG00004519 tomm40l,si:dkey-71l1.1,LOC103030645,LOC107691796,LOC107603199,LOC107574698,LOC107745123,LOC107663776 coding upstream 359082 52227620 ~ 52232504 (-)
AMCG00004518 NA coding upstream 368676 52237214 ~ 52240865 (-)
AMCG00004521 grik4,LOC108439963,LOC108277597 coding upstream 386305 52254843 ~ 52296244 (-)
G8601 NA non-coding downstream 845715 51010818 ~ 51011143 (-)
G8552 NA non-coding downstream 1100132 50755393 ~ 50756726 (-)
G8550 NA non-coding downstream 1104134 50749018 ~ 50752724 (-)
G8541 NA non-coding downstream 1134546 50721179 ~ 50722312 (-)
G8524 NA non-coding downstream 1162055 50694574 ~ 50694803 (-)
G8758 NA non-coding upstream 190198 52058736 ~ 52059501 (-)
G8759 NA non-coding upstream 194866 52063404 ~ 52065450 (-)
G8765 NA non-coding upstream 222331 52090869 ~ 52091247 (-)
G8769 NA non-coding upstream 248342 52116880 ~ 52163082 (-)
G8776 NA non-coding upstream 299802 52168340 ~ 52168541 (-)
AMCG00004481 NA other downstream 1118342 50730963 ~ 50738516 (-)
G8542 foxred1 other downstream 1131505 50723867 ~ 50725353 (-)
AMCG00004480 LOC107565095,LOC104942062,LOC107576893 other downstream 1135933 50710839 ~ 50720925 (-)
G8501 NA other downstream 1183483 50671066 ~ 50673375 (-)
AMCG00004467 trappc4,LOC106612982,LOC107561742 other downstream 1631032 50209983 ~ 50225826 (-)
AMCG00004505 NA other upstream 74155 51942693 ~ 51954532 (-)
G8760 NA other upstream 196988 52065526 ~ 52065882 (-)
G8761 NA other upstream 199515 52068053 ~ 52071586 (-)
AMCG00004529 bco2 other upstream 981945 52850483 ~ 52874108 (-)
AMCG00004533 NA other upstream 1030221 52898759 ~ 52911752 (-)

Expression


Co-expression Network