AMCG00004528


Basic Information

Item Value
gene id AMCG00004528
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 52809595 ~ 52821661 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004528
TGCCACTAGAAAACGCATTTGTTTCCTGCgagtgttgtttattttctccagtaTTCAAGGTTCAAAACTTTTAAATGGAATTCATATTTATCAGGTAGAATGCACAGTTATATTGCGTTCAGAGGGAGAGTAAGTGTTGGATTCATTTCCCCCAGGAGCACTTTGCTAACGCTTCTGACTTCTGCAGGTTTGCTTTACTCGCAAGCTGTTTGGCTGTCCGCCCGTGCAGCGTACGCGCAGGTCCACTTTCTGATCACCTCCAAGGACGGTGCCGGACTGACTCTCTTCACATCCGAATCGCTAAGGGATTCATGGAAGCGCACAATGTCACCGTGTCTGTTGAAGACAAAAATGCACTCGCTCATCCGCTCGGTCCCTCCCTGGATGCTAAATGTGGGTATAAACAGCGGAGGAACTACAGAGGAGATCTGGAAGTCACGGTTTCTCTCATGGCCTGTCACGTGTATTTAGAGcaGCAAAAAGAGCGCCTTGTGTTCAATATGGCAGTGACCTACGTCCCCAGGGACGCCTCCAGCCCCCCCACCACGGAGgtcttctccttctcctgtcACCAAAGGCTGGGAAGCGCCCGACGCCGAGTGCTCTGTGAAGAGAAGTACATAGAGGTGTCCCTCAACATTGATGTCCCCTTTCATTATTCTACGGGGCAGCACAAGAAGGCCGGAGCCGCCGCCGCCAGCCGCTGGTATTTCGACATTCGCTACCCCGATGGCAGTACGGTGACCAGGGACCAGAAGTGGGTGTGGTCCCACGGCATCGGGGTGAACACGGAGAACATGGGCGGCTGGATCACTCTCAGGGTTCCCCACGGCAGCCCCATCGTCCGCAGGAagGATTACCATGGTTATCCCACCCTGGGTTATAACGTGGTGGCCAAACACGAGGAGTTGCTGACTGGACTGCGCTACAACCTGAGTGCGGTCTGTCCCATAGTCAAGGTGAGCTGCGAGGGCAACAACGTGACTGTGGCCGCCGTCTCCCTGCGGCTCCCTGGCCGAGCGTCCAATACAGAGAACCTGGCCCTCCGCCTGCAGTTGGACGGCTTGTCTCTGTCCCAGGAGGACACCCTGTCCAGGGGATACTCCCTCCAGCTGCGGGACAAGGAGCTCCGGGCTTCCTTCGGCGTCTTGGCCAACCCCCTGGTCAGAGAGGGCTCTAGAGTGATGAACAGACACCAGCTGTCTCTGGTCCACGTGTGGAGGGACCGAACAGACCAGCGCAATACCAAAGCGGTCATCTTTGTGCCCGGGCACACGTGTAGTCCCCAGCCCCCGGAGGCGGTCAAGAAGAACGGGTTCAACATCACGTACGGCCCGGTCCCTAAAGACTACACCCTCTCCGCCCTCTCCATCGATGGCGTCCTCTTCCAGTCCGTCGAGGACCTGCCCTGGGGCGTCACTGTCCGGCTCGTCCAGCACCCGTACTTCCTGTACGTCCGGATCTTGGCCCGTTTCGGGAGCCGCTTGGTGCCTCGCAAGTATGTCGGTGGCTTTACCTCCCAGTACTCTGTGTGTCCCGCGCTCATTTTCAAGACCGCTGAGGGCAAGGAGGAGATCGTCGAGGAGAAGGAGCCCTACAATTTCAGTCGAGAGGATATCGTCCTCCCCGTGCTGGAGGGGTTCTGCGGGAACGGCAGCGTGTGTTTCAACGTGACCCGAGGCAACGCGGACAACTTCTGGAGCTTCCACATTTGGGACGCCCCCTTCCTGGTGAACCAGGCTGCGCAGCGCGGCCACTCCTACACCAGCCGCAAGACGCGTTTGGTCTTCTGCGTCAGCGTCGACTCGCCCGACCTGCTGCATCAGAGAGTGACACCAGGCCGGCGGACGCTGCTGCTGGCCGTGTCGTTCCGGGACCGAGCGAAGGGAGGCGTAATGGTGTCGGCGCGGCAATCCTGCACCTTCCCTTCTGCGGGGGAGCTGGAGTGCACGGAGGAGGGGCTGCTCAAAGCGAGCGGTCTGCGACTGGCCGCGTCCCCCTCGGCCGCCCTGGAGCAGCTGACAGTGCGTGACCCCAAGTGTGGCCCCTCGGAGGTCTCCCGGGGTCTCGTCTCTTTCTCCTTCCCCGTCAACACCTGTGGAACCACAGAGAAGGTGCAAGGGAGGTTCGTGGAGTTCGAGAACAAGATCTCTAACCAAAAGACGCTGGATTGGACGGCCCCCGAGTACCTGAGGTTTCATGCGACCCTGCTGTGCCGCTACAGAAGAGAGGAGTTGCTCACCATGGGTCTGGTGGGCCTAATGACCCCCCGCCCACCCCTACCGGCCCGCGGCAATGGCAACCTGACCCTGCGCATGGACATCATGAGAGACTCAACCTTCTCCTCTGCGTTCACGGCGGACGAGTTTCCAGTGGCGCGACGTCTCCGCGAGCCGGTGTTTGTCCAGGTGATGGTGGACAGCGAAGACCCCGGCCTGGAGCTCTTCCTCAGGGACTGCTGGGGCACCCTTGGCCCCCAGCCCACACACCCCATCACCTGGCCCATCATTCAGGACAGCTGCGAGCTGCAGGAGGACGAGTACCGCACTGTGTTCCACCGCGTCCGCGCCGGCTCCACGTTGGCCTTCCCTCAGCACCACAAACGCTTCGAGGTCAAGACCTTTGCCTTCGTCAAACCCGAGACCACAAAGCTGCTCAATCACCAGATCTACTTCCACTGCTCTGTGATCCTGTGCGACACCGCTGCACTGAGGACCGACGAAGCCTGCAGTGGAGACTGTATACCGCACAGGCAGAGGAGAGGGAGGCGATCCGGGTCTGAGGCCAAACCGGGCATGGTGGTGTCGGCGGGATCCATCGAACTCCTCCCTCTGAACGGCGTTGGCAAGAATGCACTGGtaaCGATTGCCAACCTGGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004528 True 2879 mRNA 0.59 21 52809595 52821661

Neighbor

gene id symbol gene type direction distance location
AMCG00004526 LOC103129659,LOC106941049,LOC104945933,LOC107657232 coding downstream 26233 52738138 ~ 52783362 (-)
AMCG00004525 NA coding downstream 75790 52726785 ~ 52733805 (-)
AMCG00004524 NA coding downstream 144368 52623406 ~ 52665227 (-)
AMCG00004523 grik4,LOC108439963,LOC107676315,LOC106529682 coding downstream 410424 52353372 ~ 52399171 (-)
AMCG00004522 NA coding downstream 472989 52317631 ~ 52336606 (-)
AMCG00004534 NA coding upstream 105700 52927361 ~ 52931681 (-)
AMCG00004532 NA coding upstream 142552 52964213 ~ 52967709 (-)
AMCG00004540 NA coding upstream 175451 52997112 ~ 52999812 (-)
AMCG00004539 NA coding upstream 184738 53006399 ~ 53008624 (-)
AMCG00004544 LOC107600790,LOC107577576,LOC107735118 coding upstream 295399 53117060 ~ 53150892 (-)
G8833 NA non-coding downstream 255222 52553919 ~ 52554373 (-)
G8829 NA non-coding downstream 440132 52369239 ~ 52369463 (-)
G8795 NA non-coding downstream 605915 52203194 ~ 52203680 (-)
G8776 NA non-coding downstream 641054 52168340 ~ 52168541 (-)
G8769 NA non-coding downstream 646513 52116880 ~ 52163082 (-)
G8981 NA non-coding upstream 280240 53101901 ~ 53104836 (-)
G9002 NA non-coding upstream 326104 53147765 ~ 53147974 (-)
G9048 NA non-coding upstream 459390 53281051 ~ 53284971 (-)
G9074 NA non-coding upstream 671834 53493495 ~ 53493710 (-)
G9141 NA non-coding upstream 840723 53662384 ~ 53663246 (-)
G8761 NA other downstream 738009 52068053 ~ 52071586 (-)
G8760 NA other downstream 743713 52065526 ~ 52065882 (-)
AMCG00004505 NA other downstream 855063 51942693 ~ 51954532 (-)
AMCG00004481 NA other downstream 2071079 50730963 ~ 50738516 (-)
G8542 foxred1 other downstream 2084242 50723867 ~ 50725353 (-)
AMCG00004529 bco2 other upstream 28822 52850483 ~ 52874108 (-)
AMCG00004533 NA other upstream 77098 52898759 ~ 52911752 (-)
G8937 NA other upstream 125151 52946812 ~ 52951387 (-)
AMCG00004551 NA other upstream 357361 53179022 ~ 53189393 (-)
AMCG00004567 NA other upstream 864755 53686416 ~ 53863369 (-)

Expression


Co-expression Network