AMCG00004539


Basic Information

Item Value
gene id AMCG00004539
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 53006399 ~ 53008624 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004539
AATAGTTGTgttgggtttttgtttgtttttaaacactcGTAGAgttcaaactttttatttttatttctattttattgaaatacggctaattgttatgttttaaagtGTGTCTAATTTTAATGCCCTCTAAGATTTAATCctatataattgttttaccCTTGgcgtattttttttaaatcggtCATCCATTTGGACTCTTTGTACGGGTTTAAATAGCCCTACTACAGAGGCTGCCGTTGAATtgaagcagtttaaaaaataataataataatgaaagaagaAATTGCGGCCACAGTTTTCTTTATCACGAGACTGGCAAAGAGACACGGGAAGCTGCCGAGGAAGAGCAGCGAGAGGCTGGCCGTGGAGCTGACCGCCATCCTGTTTGACAGATACCGCACCCACTGGTACCCGGAAAACCCCGAGAAAGGCCAGGCTTTCAGGTGTATGCGGATGAATAAGTGGCAGTTGAGAGACCCTGTACTGGAGCAGGCCTGCTGGCAAAGTGATGTCGACTATGAGGACATGGGCTTGCCGAAAGAGATCACCATCTGGGTAGACCCGGGTGAGGTGTGCTGCAGGTACGGGGAGAAGAACAAGCCCTTTAGCGTGGCAGTGCTGGATGGACCGGGTGAGGACCGCGAGTTCACCCAGCGGATCAGTAGCGCGGTGGAGAAGGCCACCTCGGACTACCACTCGGGCACTTCCTCTGAGGAGGAGACCAGCAGTGTGGCGAGTGGCAGTACCAGCCCCCTCGTGCCCAAGACCATCCCCACTGTCAGCAACCCTAACAGCGTCTACCAGTTCAGTGACTTCAGTGCTCCCCCAGCTGTACAGCAATGGACTCCCTACACCAAGAGGAAGCTCTTCCAAGGAGATGGGTACCAACACGCCCCTGCCCCAGGGTACTACCCTCCACACAAGACCTACAAGAGCTACAGGGCTTCGTCTGCCTTCTCTGGTCCGCGTGTCGACCGCTACCACTGGGTCAGCAAAAACCGCTCCTAGCCTGAGCCGCAACTGCCCTGTTGCCCTGTTGGGTTTTATCTGCTGCATCGCATGGAAATGCCACATGGAGAGTTCTAAATGTTTAACTTGTGTGTCATATTTAAAGAGATTAGCTGTTTTTGACTTGCTTTCTATGAGCTAGACTCATTACAGCACCTTTTATCTGTTGAACAAATTTATATTGTCTGTCCCCGAGTTTTAACCTTGCAAATGTAAGCttaaacttcaaaataaaacgCTTTTTATTAAATTCAAGGTTTGTAATTTGGCTGAATTTCAGCACCCAATCTGAGATGGTGCTAGTTCTGTAAAGTCCTTCTACCAGACTAGTGCAATTCTCACTCTTGCCACTTGGAGGCACCAATGGTTAACTTAAAAGCACCTAATCAGAGCTTACTTGTTCTCAAGGTTATGTAGATGTGCATTGATCTTGGTAAGTCTTTTGCTTATAGACTTTACTTTAACTATAGACACCCATCATTTTTTCACATCCAATGGCTCTCTTGGAAAAGTAATGTTTAAGATGCTTGAACACCAGAAGTCCCATCTAATTGATTTAGGTTTGAAAAGAACTTTGGTCACTAAATAGTTTGGTACAATCATAACCAGGAAAGTTTCCAATGTCTAGTGATGGAGGGCTGATTTCTGGGGGGCAGGGCTGCAGTAGAACATTTCGCCACAGATGAAAATGCAGTGTCCCAAATCATGATTCTAAA

Function

GO: NA

KEGG:

id description
K14443 TOB; protein Tob/BTG

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004539 True 1724 mRNA 0.45 4 53006399 53008624

Neighbor

gene id symbol gene type direction distance location
AMCG00004540 NA coding downstream 6587 52997112 ~ 52999812 (-)
AMCG00004532 NA coding downstream 38690 52964213 ~ 52967709 (-)
AMCG00004534 NA coding downstream 74718 52927361 ~ 52931681 (-)
AMCG00004528 NA coding downstream 184738 52809595 ~ 52821661 (-)
AMCG00004526 LOC103129659,LOC106941049,LOC104945933,LOC107657232 coding downstream 223037 52738138 ~ 52783362 (-)
AMCG00004544 LOC107600790,LOC107577576,LOC107735118 coding upstream 108436 53117060 ~ 53150892 (-)
AMCG00004553 NA coding upstream 143247 53151871 ~ 53162352 (-)
AMCG00004552 alg9,LOC107691744 coding upstream 156049 53164673 ~ 53178444 (-)
AMCG00004550 NA coding upstream 187646 53196270 ~ 53202552 (-)
AMCG00004556 NA coding upstream 276670 53285294 ~ 53290739 (-)
G8833 NA non-coding downstream 452026 52553919 ~ 52554373 (-)
G8829 NA non-coding downstream 636936 52369239 ~ 52369463 (-)
G8795 NA non-coding downstream 802719 52203194 ~ 52203680 (-)
G8776 NA non-coding downstream 837858 52168340 ~ 52168541 (-)
G8769 NA non-coding downstream 843317 52116880 ~ 52163082 (-)
G8981 NA non-coding upstream 93277 53101901 ~ 53104836 (-)
G9002 NA non-coding upstream 139141 53147765 ~ 53147974 (-)
G9048 NA non-coding upstream 272427 53281051 ~ 53284971 (-)
G9074 NA non-coding upstream 484871 53493495 ~ 53493710 (-)
G9141 NA non-coding upstream 653760 53662384 ~ 53663246 (-)
G8937 NA other downstream 55012 52946812 ~ 52951387 (-)
AMCG00004533 NA other downstream 94647 52898759 ~ 52911752 (-)
AMCG00004529 bco2 other downstream 132291 52850483 ~ 52874108 (-)
G8761 NA other downstream 934813 52068053 ~ 52071586 (-)
G8760 NA other downstream 940517 52065526 ~ 52065882 (-)
AMCG00004551 NA other upstream 170398 53179022 ~ 53189393 (-)
AMCG00004567 NA other upstream 677792 53686416 ~ 53863369 (-)
AMCG00004575 NA other upstream 1024010 54032634 ~ 54043428 (-)
AMCG00004590 LOC106612637 other upstream 1347836 54356460 ~ 54373627 (-)
AMCG00004598 NA other upstream 1433147 54441771 ~ 54450341 (-)

Expression


Co-expression Network