AMCG00004540


Basic Information

Item Value
gene id AMCG00004540
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 52997112 ~ 52999812 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004540
ATGTTGCTGGCATACCTCTCTCTGAGCACCGTCCTCCTGCTGACACGTGGGTCCACAGCTCAACTGTTCAACTGCTCCGCTGAATTCAACCGGGTCCCGGATAATCAGGACCTGAAGGTGGACTGCGGCCCCCAGGTCATCAATCTGGAGGTGAACCTCTGCACGGCCCAGTACGCTGGCTTTGACCCCACAGGCCTCGCCCTCAACAGCCAACACAACATCTCCCAGTGCGCCGGCACCATTGACACTGACGTCAGCCCCCCCGTCATCCGATACAGGCTGTCCATCACCCAAGATAATGTTTGCGCGCAGTCATTTCAGGCAAGTTTGctcttctcctctcccctcctctcttcaTACGATCCAGGAAAAGACACTTCAGCTGGGATTGACTTTGGCTCATGTATCGGGCCCACTGTATATAGAGAGGTGGATGCTGCCTTCCCTAATGACGAGTCTATTGTAAACGAGGGCGCAGGCAACGGGATCTTCAGCTCCTTCTCCAACATCCAGTCGGTGCTCATCGCCGGCTATATCGACACTCCGAAATCGTCCCAGGGGATCATCAGCTACTCGACTGACCTGTACTACTACTTCACCTGCCGCTACCCCCTGGAGTACTTCCTCAACAACACACAGATCATCACgTCCTCAGTGTCATTAGCCATGAGTGACAACAATGGCTCGTTCATCAGCACCCTCAGCATGAAGCTGTACAATGACTCCAGCTACTCTTCTCCACTGACTGTCCCAGACATCGGCATACCACTGCAGACTCTGATCTACGTGGAAGTCAGTGCCAATAACCTGACTGAGAATTTTAATGTGTTGCTGGACCACTGTTTCGCCACACCCTCGCCTTTCAACGCAACCGGCGATGATGAGCACAACTTCTTCATTGGGACCACCATAGTGAAGAACGGTGTAGGCCAGAAATCGCAGTTCTTCTTCGAGGCGTTCCGCTTCGTACAGCACAGGGACAAGCCGATCTCCACGTTGTACCTGCACTGCATCACCCGGCTGTGCCAACCCCAAGACTGCCAGAACCTGCTGGCGGTGAGCTGCCCCTCTCCCATCTCCTCCATCCCCTCCATCCCCTCTTCCCTGTCTCCTCTCATCTCTCGCTCATCCCATGACTCTACCGACGCCCCACACTTTAGTTACTTGTACACAGCCctgctgtatttaaacaagCAGCTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004540 True 1203 mRNA 0.54 8 52997112 52999812

Neighbor

gene id symbol gene type direction distance location
AMCG00004532 NA coding downstream 29403 52964213 ~ 52967709 (-)
AMCG00004534 NA coding downstream 65431 52927361 ~ 52931681 (-)
AMCG00004528 NA coding downstream 175451 52809595 ~ 52821661 (-)
AMCG00004526 LOC103129659,LOC106941049,LOC104945933,LOC107657232 coding downstream 213750 52738138 ~ 52783362 (-)
AMCG00004525 NA coding downstream 263307 52726785 ~ 52733805 (-)
AMCG00004539 NA coding upstream 6587 53006399 ~ 53008624 (-)
AMCG00004544 LOC107600790,LOC107577576,LOC107735118 coding upstream 117248 53117060 ~ 53150892 (-)
AMCG00004553 NA coding upstream 152059 53151871 ~ 53162352 (-)
AMCG00004552 alg9,LOC107691744 coding upstream 164861 53164673 ~ 53178444 (-)
AMCG00004550 NA coding upstream 196458 53196270 ~ 53202552 (-)
G8833 NA non-coding downstream 442739 52553919 ~ 52554373 (-)
G8829 NA non-coding downstream 627649 52369239 ~ 52369463 (-)
G8795 NA non-coding downstream 793432 52203194 ~ 52203680 (-)
G8776 NA non-coding downstream 828571 52168340 ~ 52168541 (-)
G8769 NA non-coding downstream 834030 52116880 ~ 52163082 (-)
G8981 NA non-coding upstream 102089 53101901 ~ 53104836 (-)
G9002 NA non-coding upstream 147953 53147765 ~ 53147974 (-)
G9048 NA non-coding upstream 281239 53281051 ~ 53284971 (-)
G9074 NA non-coding upstream 493683 53493495 ~ 53493710 (-)
G9141 NA non-coding upstream 662572 53662384 ~ 53663246 (-)
G8937 NA other downstream 45725 52946812 ~ 52951387 (-)
AMCG00004533 NA other downstream 85360 52898759 ~ 52911752 (-)
AMCG00004529 bco2 other downstream 123004 52850483 ~ 52874108 (-)
G8761 NA other downstream 925526 52068053 ~ 52071586 (-)
G8760 NA other downstream 931230 52065526 ~ 52065882 (-)
AMCG00004551 NA other upstream 179210 53179022 ~ 53189393 (-)
AMCG00004567 NA other upstream 686604 53686416 ~ 53863369 (-)
AMCG00004575 NA other upstream 1032822 54032634 ~ 54043428 (-)
AMCG00004590 LOC106612637 other upstream 1356648 54356460 ~ 54373627 (-)
AMCG00004598 NA other upstream 1441959 54441771 ~ 54450341 (-)

Expression


Co-expression Network