AMCG00004553


Basic Information

Item Value
gene id AMCG00004553
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 53151871 ~ 53162352 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004553
ATGAGGACCGAAtgtctgcagcagctcctcagTGATAACGGTGTGTTGTTAAGGAACCAGTTTCAGCCACCGAGCCCCCTCCTCTGCCAAGTCGCTCGCAGGGTCCCTCGGAAGCGGGCATCGCCATGGAAACTGGGCATTGTGAGGCGGCGGGGTTATCTCTGCACAGCATTTCCCTCTCAAGGCACTGCGCCGGCTCCCGTGTCCCCTTCCTGGGAGGTGGATATCAAACAATGTCACTACGTGGTGGACCTGGACAGTCCCACAGAGGCCCCTCGGGAGCCACGGTACGCAGCCAACAAAGAGGACTGGACTATCGTCGCCTACAAACCATTCCTGGATGCCACACGgTCTTCACAGCCGTTCCGCGCCTTCTTTGTGCCGTACCTGTCTGAGCAGCACACTACCTACGCCAAATACGTCATCCTCAAGCCCAAGAAGCCCAAACCGGCCCGGAAACGGACACAGCCATGA

Function

GO:

id name namespace
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004553 True 474 mRNA 0.59 3 53151871 53162352

Neighbor

gene id symbol gene type direction distance location
AMCG00004544 LOC107600790,LOC107577576,LOC107735118 coding downstream 979 53117060 ~ 53150892 (-)
AMCG00004539 NA coding downstream 143247 53006399 ~ 53008624 (-)
AMCG00004540 NA coding downstream 152059 52997112 ~ 52999812 (-)
AMCG00004532 NA coding downstream 184162 52964213 ~ 52967709 (-)
AMCG00004534 NA coding downstream 220190 52927361 ~ 52931681 (-)
AMCG00004552 alg9,LOC107691744 coding upstream 2321 53164673 ~ 53178444 (-)
AMCG00004550 NA coding upstream 33918 53196270 ~ 53202552 (-)
AMCG00004556 NA coding upstream 122942 53285294 ~ 53290739 (-)
AMCG00004557 NA coding upstream 135104 53297456 ~ 53298097 (-)
AMCG00004559 NA coding upstream 364516 53526868 ~ 53533837 (-)
G9002 NA non-coding downstream 3897 53147765 ~ 53147974 (-)
G8981 NA non-coding downstream 47035 53101901 ~ 53104836 (-)
G8833 NA non-coding downstream 597498 52553919 ~ 52554373 (-)
G8829 NA non-coding downstream 782408 52369239 ~ 52369463 (-)
G8795 NA non-coding downstream 948191 52203194 ~ 52203680 (-)
G9048 NA non-coding upstream 118699 53281051 ~ 53284971 (-)
G9074 NA non-coding upstream 331143 53493495 ~ 53493710 (-)
G9141 NA non-coding upstream 500032 53662384 ~ 53663246 (-)
G9145 NA non-coding upstream 531852 53694204 ~ 53695507 (-)
G9146 NA non-coding upstream 535024 53697376 ~ 53700585 (-)
G8937 NA other downstream 200484 52946812 ~ 52951387 (-)
AMCG00004533 NA other downstream 240119 52898759 ~ 52911752 (-)
AMCG00004529 bco2 other downstream 277763 52850483 ~ 52874108 (-)
G8761 NA other downstream 1080285 52068053 ~ 52071586 (-)
G8760 NA other downstream 1085989 52065526 ~ 52065882 (-)
AMCG00004551 NA other upstream 16670 53179022 ~ 53189393 (-)
AMCG00004567 NA other upstream 524064 53686416 ~ 53863369 (-)
AMCG00004575 NA other upstream 870282 54032634 ~ 54043428 (-)
AMCG00004590 LOC106612637 other upstream 1194108 54356460 ~ 54373627 (-)
AMCG00004598 NA other upstream 1279419 54441771 ~ 54450341 (-)

Expression


Co-expression Network