AMCG00004572


Basic Information

Item Value
gene id AMCG00004572
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 53910377 ~ 53928613 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004572
CGCAGCCAATCACGTCTCCACTGGCTGCCTGGGTCTGCCGGCTTCCGCTGCAGGCCCCGCCCCTCGCTGTGTGCGGCTGCCCGCGTCTGTGTGCTGCGTCACTTCCGGCATGAGGGGGGTCGCTCTGACAGCTGGATCAACAATAACAAGAACCCCAGTCTGCTAAAGAAGGGGGGGTGGTTCACCGAGGCGCACGGGTGCACGGAACAGCCTCTGCCTGAGGGGACGGATCGAGAAGCTGCCGCAGAAGGGCGAGGGGGGCAGCGTCTGTGCGTTCCTGCTGCGGTGCTGTTCCTGGCGATCCCACGAGTCGGCTGGAAGGGAATCTCCCTGTTGGCCGTACCGTCCCTGTCCTGTCCTTTCAGGCTCGCTGGGGAGGGCCCTGAGAGTGGATCGGGGGAGAAGGAGGCAGCCGCAGTCACAGACGGCGAGGCCATGTGGGAGGGGGCGACAGAGGCGGTGGTAGAGGGACGCACCTTCATGCAGGTGCTCAGCGAGAAGTACAGCCCCGAGAACTTCCCCTACCGCCGCGGGCCGGGGATCGGCGTGGTGGTGCCGGCCGGGCCACAGGGCTCGCCCATGAAAGACCGCCTGAACCTGCCCAGTGTGCTGATCGGTAAGATCGTGTCCAACATCCCCAACCTGGACTTCCTGAACCTGAGCTCCAACCCCCTGAGCGAGGTGGCTCTGGACCTCAGCTGCGCAGAGGCCTTCGTCAGGGTGCGGCGGCTCGTCCTCAACAATACGCGGGTCTCCTGGGACACCGTGCACACCTTCACCCACCAGATCCCAGATCTGGAAAACCTGGTCCTGGCCAACAACAACCTCACTTCCATCCAGGACTCGGGGGACACGCTGTGCAGACTCTTCCCCTGCCTGCGCTCCATCAACCTGCACAACTCAGgtTTGAATAGCTGGGAAGACATTGAGAAACTGAACTTCTTCCCGAAGCTGGAGGAGGTGAGGCTCCAAGGAATCCCCCTACTGCAAACCTACACCAACACGGAGCGCCGGAGCCTCATCATTGCACAGTTGCCTTCTGTGTCAATGCTGAATGGCAGCGTGTACGGGAAGCTGGCCCCGCTGGCGGACATCGACTTGCGGCCACGCTGCCATGCCAAGGTGGAGGTGCACTGCGAGGACAAGGTGGAGCTGGTGAGCATCCGGCTGGACCAGACGGTGGCCGAGCTGAAGAAGCAGCTGCGGAGGGTGGTGCAGCTATCCACGGGCAACATGCGCCTGTACTACATCGACAAGGACGTGGCCTGCGCCTTCGGGCCCGAGGAGATGAAGTATAGCTCGCGGGCGCTGCACTCCTACAGCATCCGAGACGGCGACGAGATCCTGGTGGTGCCCAAATCCAAG

Function

GO: NA

KEGG:

id description
K22449 TBCEL; tubulin-specific chaperone cofactor E-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004572 True 1365 mRNA 0.63 9 53910377 53928613

Neighbor

gene id symbol gene type direction distance location
AMCG00004569 tecta coding downstream 5354 53878275 ~ 53905023 (-)
AMCG00004560 NA coding downstream 282495 53618422 ~ 53627882 (-)
AMCG00004562 usf1,LOC107657261,LOC107601709 coding downstream 299108 53607807 ~ 53611269 (-)
AMCG00004561 NA coding downstream 304961 53587275 ~ 53605416 (-)
AMCG00004558 LOC102781260 coding downstream 324165 53573530 ~ 53586212 (-)
AMCG00004571 LOC105907815,LOC100708948,LOC105920897,LOC103369551,LOC102197023 coding upstream 7131 53935744 ~ 53949364 (-)
AMCG00004573 NA coding upstream 35372 53963985 ~ 53965707 (-)
AMCG00004570 NA coding upstream 51132 53979745 ~ 53988395 (-)
AMCG00004574 ddx6 coding upstream 63838 53992451 ~ 54004550 (-)
AMCG00004579 NA coding upstream 176448 54105061 ~ 54122487 (-)
G9161 NA non-coding downstream 44702 53864951 ~ 53865675 (-)
G9153 NA non-coding downstream 80597 53794078 ~ 53829780 (-)
G9149 NA non-coding downstream 188255 53721242 ~ 53722122 (-)
G9146 NA non-coding downstream 209792 53697376 ~ 53700585 (-)
G9145 NA non-coding downstream 214870 53694204 ~ 53695507 (-)
G9217 NA non-coding upstream 157962 54086575 ~ 54087038 (-)
G9261 NA non-coding upstream 276940 54205553 ~ 54206013 (-)
G9273 NA non-coding upstream 329950 54258563 ~ 54273287 (-)
G9427 NA non-coding upstream 720438 54649051 ~ 54676988 (-)
G9431 NA non-coding upstream 749051 54677664 ~ 54677917 (-)
AMCG00004567 NA other downstream 47008 53686416 ~ 53863369 (-)
AMCG00004551 NA other downstream 720984 53179022 ~ 53189393 (-)
G8937 NA other downstream 958990 52946812 ~ 52951387 (-)
AMCG00004533 NA other downstream 998625 52898759 ~ 52911752 (-)
AMCG00004529 bco2 other downstream 1036269 52850483 ~ 52874108 (-)
AMCG00004575 NA other upstream 104021 54032634 ~ 54043428 (-)
AMCG00004590 LOC106612637 other upstream 427847 54356460 ~ 54373627 (-)
AMCG00004598 NA other upstream 513158 54441771 ~ 54450341 (-)
G9414 NA other upstream 648027 54576640 ~ 54620055 (-)
AMCG00004618 dscaml1,LOC107592669,LOC107699174,LOC107728164,LOC107699210,LOC107566081 other upstream 986971 54915584 ~ 54919938 (-)

Expression


Co-expression Network