AMCG00004581


Basic Information

Item Value
gene id AMCG00004581
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 54195348 ~ 54204995 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004581
GTTGGGGTTTGGATGCAGCAGCGCGCCAAACAGCCGCGGGAGAGCAGCTGCGCAGCCGCTGTCATTGTCCGGACCGACACCACACACGACCGGCACCGCGGACGGCAGCGGGCCGGGACACGgcgggacgggacgggacgggacgggacgggacggggGTGGCGAACTTTTTAAACACTTCGAAACTTTGCGTCTTTTTAAACGGGTGACGTACCGCGAAGTTCAGAGCAGCATCTCTGCACAGATAGAGCCGGATAGGAGAGGATAGCATAACCGCCAAGGACTAACCGAGTTcaactgaataaataatcaGACACGCATTTCCAGGCGCTGTGAAGCAGCCCGGGGCGCAGGCTCTCTCTGCCCGGGAGGGGAGGCGCCGAGGCCGGCCTGTGCGGGTCTTGAGCTCGTCGCTGGGGTCGCAGCGAGTCCCAGtgttgTCCTCGTCTGTGGCAATGGCGGTGCCCTTTGTGCAGGACTGGGACCTGGTTCAGACCCTGGGCGAGGGGGCGTATGGAGAGGTGCGTCTCCTGGTGAACCGGCAGACCGGGGAGGCGGTGGCGGTGAAGGTGGTGGACACCTCCCGGGCGGCCGACTGCGCCGAGAACATGAAGAAGGAGGTGTGCATCAACAGGCTGCTCAGCCACGCGGCTATCGTGCGCTACTTCGGGCACCGGCGCGAGGGCCCCACGCAGTACCTGTTCCTGGAGTATTGCAGCGGGGGGGAGCTCTTCGACCGCATCGagCCGGATGTGGGGATGCCGGAGTCGGACGCTCATCGTTTTTTCCAGCAGCTGATGGCGGGCGTGGAGTACCTCCACAGCGTCGGCATCACTCACAGAGACATCAAGCCCGAGAACCTGCTGCTGGACGAGGGAGacaACCTGAAGATCTCGGACTTCGGCCTGGCCACCATGTTCCGGCACCGCGGGCGCGAGCGGCGGCTGGGCCGGCTGTGTGGCACGATGCCCTACGTGGCGCCCGAGTTGCTCTCCCCGGGCGAGTTCCACGCCCCGCCAGTGGACCTGTGGGCCTGCGGCATCGTCCTCACCGCCATGCTGGCCGGggAGCTGCCGTGGGACCAGCCCAGTGAGAGCTGCCAGGAGTACTCTGACTGGCTGCAGAAGAAGACCTTCCTCACACCCTGGAAGAAAATCAATGCTGCTCCCCTCAGTCTGTTGTCCAGGATGCTGCTGCACGACCCTGACAAGAGGATCACCATCCCAGACATCAAGAAGGACCGCTGGTACTGCCGCAGCTTCAGGACAGGGGCGAAACGCCTGTCCTCGTCCAGCGGGGGGCAGTGTGACTCGCAGGGCTCGGGGAATAAGATGCTGCGCGCCGACTCTGAGCAGACCGGCCGGACCCGCAGggaggagGGTGCGCAGGTGTCCAGCTCCCAGCCAGAGCCGGTGACGGCGCTGGGCTcgtgggagggcccGTGGCAGCGTCTGGTCAGGCGGATGACGCGCTTCTTCACGGCGGTGGGAGAGGACCGCACCTGCTCGGCTCTCCGGGACGTGTGTCTCGGCATGGGCCACACCTGGAAACAGAGCTGCACCAATCAGGTGACGGTGTCGACGACAGATCGCCGAAACAACAAGCTGATCTTCAAGGTGCACCTGCTGGAGATGGAGCAAAGGATTCTGGTCGACTTCCGGCTGTCCAAGGGTGACGGCCTGGAGTTCAAGCGTCTGTTCCTGAAGATCAAGCAGCAGCTCGGCGACATTGTCAGCCACCAGAAGGTTTCGCTGCCCCTCCCCGTCACATGACGCGGGACACGGAGGAGCCCGCCGCCATCACGAGCGCACGGACAGACGCACGGACTCACGGTCACATGCTATCCAGCATACAAATGTACACGCAAACGCAAATCCCGATCAAGggggcagttttttttttgtaggtcacAGAAACCCCCAACTCAAAACCGTCACAGACACCCCGCTCTCAGTAGTTTTATTCTAGTTTAGCACTCGTCCTCGGTCACACCCCAGAAGAGAACGGCAGCCGATCAATTTGAAAGCGCCTCAAATGAGAAGCCTCTGAGTGGAGTGGTGATCGGGCCCCGGGGGCGTGTCCACAATGAACACAGTTTTCCTTCGTTGTTTTCTTGATGTTGTAGAACACTAAAGCGCTCGCCGCTCCAGATCCGACCCTCCGGTGTTGCATTTCGTAGCCACGAGAGTTGGGCCTTTTTATTCATCTGTTGTAGTTCTTTGCTGGGAGGAGAATGAGAAGAAATAAATGTGAACGCGGTTGCCCGTCCCCCAGATGGAGACGTTGTGGATATGTCTGTTCTCAATGTGGTTTGTTTggaatgatgataataataaataaatattgttgtgttgttCAGAGAGTGTGACTGGATCAGTGTGTCCGCTGAGCTGCGCCCAGCACAAATACTCTCGTAGTTTCTAACGTGAGAGATGTATCTGTCCTGTGTTGGGGGAGTGTGCCGGTAAAGGATCTGCG

Function

GO: NA

KEGG:

id description
K02216 CHEK1; serine/threonine-protein kinase CHEK1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004581 True 2478 mRNA 0.60 13 54195348 54204995

Neighbor

gene id symbol gene type direction distance location
AMCG00004579 NA coding downstream 72861 54105061 ~ 54122487 (-)
AMCG00004574 ddx6 coding downstream 190798 53992451 ~ 54004550 (-)
AMCG00004570 NA coding downstream 206953 53979745 ~ 53988395 (-)
AMCG00004573 NA coding downstream 229641 53963985 ~ 53965707 (-)
AMCG00004571 LOC105907815,LOC100708948,LOC105920897,LOC103369551,LOC102197023 coding downstream 245984 53935744 ~ 53949364 (-)
AMCG00004582 NA coding upstream 1085 54206080 ~ 54219868 (-)
AMCG00004583 NA coding upstream 18808 54223803 ~ 54226053 (-)
AMCG00004589 NA coding upstream 126253 54331248 ~ 54342566 (-)
AMCG00004591 NA coding upstream 150012 54355007 ~ 54356449 (-)
AMCG00004592 NA coding upstream 168704 54373699 ~ 54373947 (-)
G9217 NA non-coding downstream 108310 54086575 ~ 54087038 (-)
G9161 NA non-coding downstream 329673 53864951 ~ 53865675 (-)
G9153 NA non-coding downstream 365568 53794078 ~ 53829780 (-)
G9149 NA non-coding downstream 473226 53721242 ~ 53722122 (-)
G9146 NA non-coding downstream 494763 53697376 ~ 53700585 (-)
G9261 NA non-coding upstream 558 54205553 ~ 54206013 (-)
G9273 NA non-coding upstream 53568 54258563 ~ 54273287 (-)
G9427 NA non-coding upstream 444056 54649051 ~ 54676988 (-)
G9431 NA non-coding upstream 472669 54677664 ~ 54677917 (-)
G9445 NA non-coding upstream 488351 54693346 ~ 54789735 (-)
AMCG00004575 NA other downstream 151920 54032634 ~ 54043428 (-)
AMCG00004567 NA other downstream 331979 53686416 ~ 53863369 (-)
AMCG00004551 NA other downstream 1005955 53179022 ~ 53189393 (-)
G8937 NA other downstream 1243961 52946812 ~ 52951387 (-)
AMCG00004533 NA other downstream 1283596 52898759 ~ 52911752 (-)
AMCG00004590 LOC106612637 other upstream 151465 54356460 ~ 54373627 (-)
AMCG00004598 NA other upstream 236776 54441771 ~ 54450341 (-)
G9414 NA other upstream 371645 54576640 ~ 54620055 (-)
AMCG00004618 dscaml1,LOC107592669,LOC107699174,LOC107728164,LOC107699210,LOC107566081 other upstream 710589 54915584 ~ 54919938 (-)
G9604 NA other upstream 1162590 55367585 ~ 55420058 (-)

Expression


Co-expression Network