AMCG00004628


Basic Information

Item Value
gene id AMCG00004628
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 55205085 ~ 55219718 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004628
CCTATAGTCATTTCACCACATATCAGCTGCTGTCCAGTGTGTTTCAACAGAAGAGAAAGGCAGAAAAGGAGAAGTGGTAGCTCTTCCAGGCACAAAGAAGATTGTGCACAGTAACAAGTCACAGCTGTACTTTTCTCAATCTTTTTAGGAAAACCCATCTTTGAAGATCACCAAGACCATGACTGCCCCCTCTGTTGTCAACTCCAGGCAGATGACTATGATGATGACACCGACCCCAGCCCCAGGGGAGACTCAGTTCAGCAATCTCTCTCAATGGCAGTCAATGCCTAACCCTGCTGTTGGCCAGGCCCAAGATAATCTGAGGAGGTTCTTGAAAGGAGAGCCAAAAGCCCTGGgaTATATCATCTCTGGCTCCCTCTCTGTGGCTGTGAACCAGAACTCTCGCTCACACTTGATCGCAGGAGCCATTGCCATGAACATCATCAGTAGCATTGTGGCATCCATAGGAATAATCCTCTATGCCTTAGAgatggttttaattaatcaatttatttgcCAACAATCTTCATACATTTCCAACAATGTATTACAGGGGGTGAATGGGGTGATGCTGGTCCTCTCTCTGCTGGAGTTCTGTATCGCCATCTCCATCTCTGCTTTCGGCTGCAAGGCGACCTGCAATCAGTCACCTGTGtcCATAGTCATTGTCCAGCAAGTCTCCACCAACCAACTACCTCAGGCTCCTGTGCAAAACTGGGCCCCTGAGCCTCTGCCCCAGTCTCACTCCAAGGGCCCCACAGATCTGGAGTCAAACTATATAACCCCACTGCCATATGACAAAAACCAGGAAATATATGCAGAGGTGATCTAGCTTTGCATTCCTCCTGCAAATTCGTTACACCCCTTTTCACACTGGGAACACTTGTAAGTGTACAGACTATGGCAGAGATACCAAGTGTGCTCAGCAATTTTCAGGGGAAACATCCTAAGATTGTTTCTCTTTCACACTGGATGTGTGCTGAGTGCATCTTTTCAAGTTCCCCATCACATCACACATCTGCAAAGAAAAGCACAGGATCTTGTAgtgggaattattttattatttttcttatattgtttatattacttttattatctTCATATGGTTACCATTTTTGGTAACGCTTTATTTGAACAACCCTCTATGTAGCCTACATAAAGGCAATATAACACAGCCATAATACATTCAAAACCAGCCAAAACCATTTTTCCAACTGACATAACAGGCACATAAGTCTTCATAACACTGATTATAGCACTCTCtatgaaatgtttgaaataacCATACCTGCCACATGTCATAAAATGATTCCTCTTGATTTTGGGGGTAAAGCGTTATAATGCAGGtgtaaatacatactgtataagaCATATTGTTATAACACCCTGCTATGAAACATGGAACATAACATCTTGCCATAGGACACCAAAGAAAATTGTGGACAATATATATGCACAGCTTGGTACATATTGTTCTCATCATAATTAATATTGTGTTCTGTTCATTGTGGATCTAAATGGATTACTGATGTACATCTGTATCTTATTGTTTGATCATGTCactcttttcttattttataataaatatatacctttG

Function

GO: NA

KEGG:

id description
K22190 MS4A3S; membrane-spanning 4-domains subfamily A member 3/4/8/12/15/18

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004628 True 1597 mRNA 0.41 6 55205085 55219718

Neighbor

gene id symbol gene type direction distance location
AMCG00004627 NA coding downstream 63596 55140905 ~ 55141489 (-)
AMCG00004625 ugdh coding downstream 68998 55116637 ~ 55136087 (-)
AMCG00004620 NA coding downstream 169133 55030260 ~ 55035952 (-)
AMCG00004621 NA coding downstream 186985 55009704 ~ 55018100 (-)
AMCG00004622 NA coding downstream 206657 54977847 ~ 54998428 (-)
AMCG00004633 NA coding upstream 5117 55224835 ~ 55270161 (-)
AMCG00004630 NA coding upstream 52625 55272343 ~ 55293024 (-)
AMCG00004631 NA coding upstream 91682 55311400 ~ 55313771 (-)
AMCG00004629 NA coding upstream 94678 55314396 ~ 55336233 (-)
AMCG00004637 NA coding upstream 240535 55460253 ~ 55462726 (-)
G9533 NA non-coding downstream 88591 55114342 ~ 55116494 (-)
G9523 NA non-coding downstream 130710 55074046 ~ 55074375 (-)
G9517 NA non-coding downstream 184989 55019897 ~ 55020096 (-)
G9504 NA non-coding downstream 196287 55007762 ~ 55008798 (-)
G9512 NA non-coding downstream 201282 55001583 ~ 55003803 (-)
G9570 NA non-coding upstream 43207 55262925 ~ 55263287 (-)
G9593 NA non-coding upstream 127065 55346783 ~ 55357633 (-)
G9643 NA non-coding upstream 334106 55553824 ~ 55559308 (-)
G9656 NA non-coding upstream 358558 55578276 ~ 55584995 (-)
G9650 NA non-coding upstream 365330 55585048 ~ 55605575 (-)
AMCG00004618 dscaml1,LOC107592669,LOC107699174,LOC107728164,LOC107699210,LOC107566081 other downstream 285147 54915584 ~ 54919938 (-)
G9414 NA other downstream 585030 54576640 ~ 54620055 (-)
AMCG00004598 NA other downstream 754744 54441771 ~ 54450341 (-)
AMCG00004590 LOC106612637 other downstream 831458 54356460 ~ 54373627 (-)
AMCG00004575 NA other downstream 1161657 54032634 ~ 54043428 (-)
G9604 NA other upstream 147867 55367585 ~ 55420058 (-)
G9608 NA other upstream 162498 55382216 ~ 55388939 (-)
AMCG00004640 NA other upstream 309932 55529650 ~ 55551225 (-)
AMCG00004649 NA other upstream 517847 55737565 ~ 55743297 (-)
AMCG00004653 znf384l,LOC108433737,LOC107665159,LOC106605395 other upstream 594684 55814402 ~ 55846171 (-)

Expression


Co-expression Network