AMCG00004631


Basic Information

Item Value
gene id AMCG00004631
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 55311400 ~ 55313771 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004631
ATGAAACAGGTGAAGTTGTCTCCTAGTTGCCTGTTTGTTCACCAAAATGTGGGAGAAATCACAGCAGGAGAGAAAAACATGGAAGGGAGAAGGAGCCTTCAGGAGAGACTTGACAAAATGACCAAAATTGCTGCAGAACAGGAGCAATGCAATGTTACAAGATTCAGTGATGTCATCAGATTTGACgtgaacacacatacacattattttgcTCATCTTTGGGAAGGAAATCCTCCTATGGCACCTCCAAACCCAACTTATAGCCAAAATGTACAGGAGCTCAAGAGCTTCCTTTTCACAACTGTTAAACACCAAACTGATGGCaagattttaaagttttctgaaCTGAAAACCCGTGTCCAGGACCTTTGGAAAGCACTGCTGAGTGAGAactttgtttttagtttcagGAATTCTTTAGTGATTGCAGTGTATAACAAGCTTGAAGAAAAGTATAGAACATGGACTTGGGATCTTAGACGCCATATGCTGGAATTGGAAAACAATCtgattaatcaaatcaaaaacaagatGGGTTTGGATTCTAGAATATTGAATGATATGGAAAAAaagAGTCAGCAACAGCTGCATGAAAAGAAATATGACTATGAGGATAAGCTGTTGAGGAGCAGCAAAGAGCTGGCCACAGAATTGAAGGCCAAGGCCACAGATAAGGCTGAAATGGAGAGAGCTTTTCAGAAACTGTGGTCTAATTGGGTTTCTGAAGTAGCATCAGATTCCAGGCCTTGTGAAGATGAGATTCAAGTGGAAGTGGATGTAGAGAAAATCCTCTTACATCACTTTGGAAACCAAAAAGGAATcactaataaaatgaaaaactatacCAGTACtaacagcaaaacattttcGCTCACTTCTTCTTCGCACCTTGAAttaaatttcagtttgtttaaagGTCACTGGCGTTTAACAAAAGAAGATAAGCAAAAGGCAGAGGATTATTGCAATTTATTCTCTCAAAAAATAAAGGATTACATCTctaagaaagagagagagaaacttgaTTATAGCCAGCACTACATACATGAAATGATAAAAATGATATCTGAAGAAATAGTCCAATGCAACAACTCACAGGAAagatttaaattcacaaaggAGTATGAGATAGACTTTACTATACATTTATGTAGAATGTCAGTCTCTAGGTTTGAAGCAATGCATCAAGCATTCCGCAAGGCCAGTGATCCAGTTATCTACCTAGGGAAGAAGAGAGATGATTATTTCAAAACCTTTCAGACCTTCTGTCAAGGAGCAACAACAGTTGCCATTTTTGCAGACTTTTTGGCCAGTAAACTGCAAACTGCTATCCATCAAGCTGTTTATACTAAAGTGTGCCTTGACATAGCAGACTTAATGCAGAACAACTGTCAAGCACTAAATGGAAACCGAGAAAAGTTAGAATTCCATATTCTAAAGGAACTGGCAGCGAAGCAAAATTTTCAAGCTTTCCAGATGTACATTAACTTTCCCAAGCAGTATTTTGAGGAGTTTATTACAAATTCTGTTTACAGTTATTGCAAAGAAAATGATaacctgaaaacatttttaaatactagaCTCAGAGGATTTCAGTGTCTGCTCTTGAAGGCCATAGCAACAGCCACAAGTAAGACAAAGGACATTGGAGGCAGTGTGGTCATGTGGCTGGATGAGTTTTGCAGTCAACTCGGAGGTGAACTACAGCTTGGAAGACAAGAGCTGAAAGCTGTTGAGCATCAGGAGATCAAAGATATCGGGTTTCTTACAGAGTCTGTGACTAAGGCTTTGGAAAACGTTGTGGAAAGTCTGAGTAAAGACTTCCAGAAAACATCCCTGAAGGACATAGAGCATGGAATGAGCAATATCATTGACATCCTGATTGAACAGCTCTGTGGGTGCTGGGAGAAGTGTCCATTTTGCAATGCTGTCTGCACAAACACAATCCCTGGACATGATGGAGACCACAGTGTTCCCTTCCATCGCCCCCAGGCTGTCACTGGTACAACCTGGTACAAAACCAATTATTTGGTCACTGATATATGTACTAGTCTTGTTGCTAGTGATTGTTCAATTGTTTTAAGTGAGTCCAACAAAATACCATATAAAAGATACAGAGATGCAGGAATTCCTTACTCACAGTGGAGTATCACTGCTGACAACTCTTCCTTGAAGTACTGGCAATGGTATGTAGCATATTTCAGAGAGAATTTAGAGAGCAGCTACAAGTCTAAATTTGAAGGCAGAGGGAACATTCCAGATACATGGACCAAGATTAAGAAAGAAGAAGCACTGTCTGAGATTGGGAAACGTCTAACAAGCaattcttga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004631 True 2331 mRNA 0.39 2 55311400 55313771

Neighbor

gene id symbol gene type direction distance location
AMCG00004630 NA coding downstream 18376 55272343 ~ 55293024 (-)
AMCG00004633 NA coding downstream 41239 55224835 ~ 55270161 (-)
AMCG00004628 NA coding downstream 91682 55205085 ~ 55219718 (-)
AMCG00004627 NA coding downstream 169911 55140905 ~ 55141489 (-)
AMCG00004625 ugdh coding downstream 175313 55116637 ~ 55136087 (-)
AMCG00004629 NA coding upstream 625 55314396 ~ 55336233 (-)
AMCG00004637 NA coding upstream 146482 55460253 ~ 55462726 (-)
AMCG00004641 NA coding upstream 300841 55614612 ~ 55628983 (-)
AMCG00004648 NA coding upstream 368681 55682452 ~ 55684986 (-)
AMCG00004654 NA coding upstream 554876 55868647 ~ 55870960 (-)
G9570 NA non-coding downstream 48113 55262925 ~ 55263287 (-)
G9533 NA non-coding downstream 194906 55114342 ~ 55116494 (-)
G9523 NA non-coding downstream 237025 55074046 ~ 55074375 (-)
G9517 NA non-coding downstream 291304 55019897 ~ 55020096 (-)
G9504 NA non-coding downstream 302602 55007762 ~ 55008798 (-)
G9593 NA non-coding upstream 33012 55346783 ~ 55357633 (-)
G9643 NA non-coding upstream 240053 55553824 ~ 55559308 (-)
G9656 NA non-coding upstream 264505 55578276 ~ 55584995 (-)
G9650 NA non-coding upstream 271277 55585048 ~ 55605575 (-)
G9661 NA non-coding upstream 293156 55606927 ~ 55607416 (-)
AMCG00004618 dscaml1,LOC107592669,LOC107699174,LOC107728164,LOC107699210,LOC107566081 other downstream 391462 54915584 ~ 54919938 (-)
G9414 NA other downstream 691345 54576640 ~ 54620055 (-)
AMCG00004598 NA other downstream 861059 54441771 ~ 54450341 (-)
AMCG00004590 LOC106612637 other downstream 937773 54356460 ~ 54373627 (-)
AMCG00004575 NA other downstream 1267972 54032634 ~ 54043428 (-)
G9604 NA other upstream 53814 55367585 ~ 55420058 (-)
G9608 NA other upstream 68445 55382216 ~ 55388939 (-)
AMCG00004640 NA other upstream 215879 55529650 ~ 55551225 (-)
AMCG00004649 NA other upstream 423794 55737565 ~ 55743297 (-)
AMCG00004653 znf384l,LOC108433737,LOC107665159,LOC106605395 other upstream 500631 55814402 ~ 55846171 (-)

Expression


Co-expression Network