AMCG00004662


Basic Information

Item Value
gene id AMCG00004662
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56147487 ~ 56162331 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004662
GTTTAAATACTGGAAGGAGGTGGAGTAGTTTTCCTGTACAGGATAGTTCTGGCAGCCGGTAGCAGAAAGACTGAGCTGGGAACACAAACCGGCACTCTTGCACAGGACACACAATGGACAAGGAAGGGACTGCGGAGCAACCCCAGAGAGTAACAGGAGACGAGTATGAGGACCTGAGACAAAGTCCAGGCAAGACAGCAGGACAGCCAGtaCATGGACGGGGGAATCGGACAACTGTTGTGGCTCTCTCGGTCCTGTGTGCTCTCTCCCTGGCTTCCAATGTGGTCCTGGGCGTCTACATgtggctggggctggggctgtgTGGCGCGATGGCTGTACTGGCCGGGCTGGTCGGCAtcgctgtgctgctgctgcgaCTCCGAAGGACACAAGGCCTATTCTGCACCCGCACTCTGAGCCTCTCCAGTCTAATCTTGCCCGATTCGTCCGTGTCTCAAAGTTCAACCTCTGTTCATAAGAATCCATTTTTAGAGATGGAAGGGACTTACACTGGGAGGCCCAACAAAGCCCCAGAGGAGGTCTAACACACAGGGGATTGTCTGGCAAGGGCTGTGCATGCACAGCTTTGACTGCAGTAAAGATATCTGATGCGAGACAAAGACAACACGGGAAACAACACTGATATTTTTACTGTCCTCTCAATATTCTCCGaatctcctctcctctgttGGAAAAGTGGACTCTTTCAATGCTATGACTCTGATAGTGTTTTTCTAGTGTGTGGAATATGGCTAATTAAACTGGAAATAATCATCAGTTATCATTCTGTAAGTCTGTTGAACACTGGTTTAGCCCAGACAGTCAACCCTTTTAAATAAGCAATTGATGaccattttaattgtgatttatttaattgtttttaaaacaaccattatattttgttgaattCACTGATGTGAAATGGTCCTGTGTGGGGGGCCTGTCTCCTATGAATGTGAGAATATGAAAGGCTCCTTGAatatttgcattacttttttattttaatggagcATTTGCAGTGATTTTTAAAGTGTCAATTTGTCTGGTCTTCattaatgaataaaagcaaTGTGCACTGATTGCTGGCTCTATTGCACCCCAGTCTTTcaacttaaacttaaaaaacaatttcttgtagaaacaacaaaaaacactgggagttgttataaataatattatgttaaatactaaataatataattaatatttataatataaccATTGATTCTGTTTTGTCCAAGTGTATCATCAATTGTTGATGTTATGTCTAATTTACTGTTATTGCAATGAAAATGTCCTTGTACAGAGGTTACTGTGACTAGCACATGGTGGTCAGCAAAAGTCTGGGACATTCAGAGAACCACAGTACTGATCCATTTGAGGTATCTTTCCTCCTCAAAGCACTATGGGGGCGATGCCATGAGAAGTGCTGTGTCTGCTGTACAGGGGGGCAAAAACTGGTACAATCAGCCAAAAATAGGACTAGTCTCCGCAATAAAAGGCAGTGTATTTGAAGAGTGGTGTCAAGCTGGCATTGTTAGTGctttacattataaattatattgaaatatattgaaaagaaaaaacaaacagtagcATTTGGTGGGATCTACACCAGCAGGCAGTGCATCCCTGATAATGAGATGTCATGAACATCTTGGACAATGTGAAAACTATTGCACTGCTGTGCCTCTGATTAGTGGTGAATACAGCACATCAATACATGTAATACACTCAATTCAATGAAAACTGTTTGTGGAGTTCGAAATGACGAAATGGTGAAGCTCATGCTGAGAAGAACATCGTCCCTCTAAGAAGCTCAGGCTTCAAAAGTCCAAAAGTTGACCATCTGGCATAATAATGACCCAAAGCATGCACCCAAGTGTACAAAGAAATGGTTCTGTGAACCAAAGGTGCCTACACCATAGAGCAAAATAGGCAATTACCCCCCACTTTTAATCAAAGTGAACACAAtgtgaacacaaaaacaatgttcttgAATGGCCACTGCAATCTCCAGGCCTAAATCTGATAGAACATTTGTGGTCTAAATATACAAAAGCATTTCCCAAGTGAAATCAAAGAAGCTAGATATATTCTGACAGAAGGAATGGTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004662 True 2118 mRNA 0.42 5 56147487 56162331

Neighbor

gene id symbol gene type direction distance location
AMCG00004664 NA coding downstream 31563 56113405 ~ 56115924 (-)
AMCG00004663 NA coding downstream 51096 56093109 ~ 56096391 (-)
AMCG00004654 NA coding downstream 276527 55868647 ~ 55870960 (-)
AMCG00004648 NA coding downstream 462501 55682452 ~ 55684986 (-)
AMCG00004641 NA coding downstream 518504 55614612 ~ 55628983 (-)
AMCG00004671 NA coding upstream 22886 56185217 ~ 56212864 (-)
AMCG00004674 NA coding upstream 239130 56401461 ~ 56409291 (-)
AMCG00004677 NA coding upstream 248654 56410985 ~ 56414424 (-)
AMCG00004678 NA coding upstream 254725 56417056 ~ 56422906 (-)
AMCG00004676 NA coding upstream 262257 56424588 ~ 56442956 (-)
G10034 NA non-coding downstream 16929 56129442 ~ 56130558 (-)
G10007 NA non-coding downstream 78625 56066549 ~ 56068862 (-)
G9794 NA non-coding downstream 111538 56033498 ~ 56035949 (-)
G9751 NA non-coding downstream 249425 55897856 ~ 55898062 (-)
G9719 NA non-coding downstream 366880 55779425 ~ 55780607 (-)
G10061 NA non-coding upstream 191597 56353928 ~ 56354406 (-)
G10067 NA non-coding upstream 308191 56470522 ~ 56471426 (-)
G10068 NA non-coding upstream 327237 56489568 ~ 56491763 (-)
G10073 NA non-coding upstream 353170 56515501 ~ 56516414 (-)
G10082 NA non-coding upstream 366285 56528616 ~ 57019807 (-)
AMCG00004665 p3h3,LOC106605089,LOC106583419 other downstream 38402 56106713 ~ 56109085 (-)
AMCG00004660 LOC106605085 other downstream 138621 56006051 ~ 56008866 (-)
AMCG00004652 NA other downstream 253401 55889982 ~ 55894086 (-)
AMCG00004653 znf384l,LOC108433737,LOC107665159,LOC106605395 other downstream 301316 55814402 ~ 55846171 (-)
AMCG00004649 NA other downstream 404190 55737565 ~ 55743297 (-)
AMCG00004672 NA other upstream 121663 56283994 ~ 56384870 (-)
AMCG00004675 chd4,LOC107724784,LOC107671917,LOC107714608,LOC107704911 other upstream 288458 56450789 ~ 56484848 (-)
AMCG00004685 NA other upstream 450696 56613027 ~ 56752935 (-)
AMCG00004692 LOC103030083,LOC107394826,LOC101069563,LOC101467164,LOC101164413,LOC106519597,LOC108443584 other upstream 523406 56685737 ~ 56690492 (-)
AMCG00004690 NA other upstream 528388 56690719 ~ 56691706 (-)

Expression


Co-expression Network