AMCG00004676


Basic Information

Item Value
gene id AMCG00004676
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56424588 ~ 56442956 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004676
ATGGTGCGGGTGGGGGACTTGGTGACCCACATTCGGATCCAGAACACAGGAGATTACTATGACCTGTATGGTGGGGAGAAGTTCGCCACGCTGTCTGAGCTGGTGGAgtgGTACCATGGCCACCTGTCCGGCCCCAGTGCAGAGAAGCTCCTGTGGGAGAGGGGGGAGCCCGGCACATTCCTGGTCCGGGAGTCCCTGTCCAAGCCTGGCGATTTCGTTCTCTCCATCCTGACTAATGAGTtcagggaggtggggggggagcaAAGGGGCCGCGTGTCCCACGTCAAGATAATGTGCAAGGtgagagaggggcagggagagagaaagggacagGAGGGGGGACTGATTGGGCGCCGGAtcagggaggggaggagggaggcagaggggatggagagggagggggagagactGAAAATACAAGAGAATACTGAAATCACTGACCCCTCCCCTCTTCCCCCTCTTGCGTGCCAGAATGACCTTTACACGCTGGGCGGGGCCGAGGAATTCGATTCACTGACGGACCTGGTGGAGCACTTCAAACGCAAGGGCATCGAGGAGGTGTCTGGAGCACTTGTGCAGCTCAAACAGcCCTATTACTCGACCCGTGTGAACGCTGCGGACATTGACAGCCGGGTTCAGGtcctgcagacagagagagatgataCCAACAAGGCAGGATTCTGGGAGGAGTTTGACGCTTTGCAGAAACAGGAGGCTAAACTGAAGAAGAGTAGAGAAGAAGGGATGAGGCCAGAGAACAAGAGCAAGAACAGATACAAGAATATCCTACCCTttgaTGAGACCAGGGTAGTGTTACAGTCGGCCCAGGCAGGAGTTGTCGGCTCAGACTACATCAATGCCAACTACGTCACGaacATGCTGAGGGAGACTGGTGATCAGAAGGTGTACATTGCCACACAGGGCTGCCTGCTGTCCACTGTTAACGATTTCTGGCAGATGGTGTGGCAGGAGAACTCCCGGGTTATTGTCATGACGACCCGTGAGGTGGAGAAAGGCAGGGGAGAAAAGGAATTTGGGCGGTTCTTAGTGCGCAATGTGAGTGAGAGGGACGCCACAGACTACAAGATCAGAATCCTGGAGCTCAGCACCCTGGACacggtTGCTGGAATAGGCCGGACTGGCACCATTGTGGTGATTGACATGCTGGTAGAGACCATCGACACTAAAGgcCTGGACTGTGACATTGACATCCAGAAGTGTATTCAGATGGTGCGGGAGCAGCGGAATGCAAAGGAGGAGGTCTATGAGAACCTGGGTGGGAAGAGCAAGAAGGACGTGAAGAAGCAGCGATCGGAGGAGAAGAAGAGTGGCTCCGTGCGCAAGAGATAGAGGAGCAagtggggaggagagagagagagagagagagagagagagaggcagggagggagagagagagaggAGGGATGACGATGGCAGACacaaggaaaattaaaaatggaagaat

Function

GO:

id name namespace
GO:0016311 dephosphorylation biological_process
GO:0016791 phosphatase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004676 True 1465 mRNA 0.55 12 56424588 56442956

Neighbor

gene id symbol gene type direction distance location
AMCG00004678 NA coding downstream 1682 56417056 ~ 56422906 (-)
AMCG00004677 NA coding downstream 10164 56410985 ~ 56414424 (-)
AMCG00004674 NA coding downstream 15297 56401461 ~ 56409291 (-)
AMCG00004671 NA coding downstream 211724 56185217 ~ 56212864 (-)
AMCG00004662 NA coding downstream 262257 56147487 ~ 56162331 (-)
AMCG00004682 cdc42l,LOC108433756,LOC108272678,LOC107552852,LOC105025850,LOC103039613 coding upstream 51700 56494656 ~ 56511693 (-)
AMCG00004684 NA coding upstream 210226 56653182 ~ 56655085 (-)
AMCG00004691 NA coding upstream 255365 56698321 ~ 56702513 (-)
AMCG00004693 NA coding upstream 262388 56705344 ~ 56705814 (-)
AMCG00004689 NA coding upstream 292887 56735843 ~ 56738249 (-)
G10061 NA non-coding downstream 70182 56353928 ~ 56354406 (-)
G10034 NA non-coding downstream 294030 56129442 ~ 56130558 (-)
G10007 NA non-coding downstream 355726 56066549 ~ 56068862 (-)
G9794 NA non-coding downstream 388639 56033498 ~ 56035949 (-)
G9751 NA non-coding downstream 526526 55897856 ~ 55898062 (-)
G10067 NA non-coding upstream 27566 56470522 ~ 56471426 (-)
G10068 NA non-coding upstream 46612 56489568 ~ 56491763 (-)
G10073 NA non-coding upstream 72545 56515501 ~ 56516414 (-)
G10082 NA non-coding upstream 85660 56528616 ~ 57019807 (-)
G10093 NA non-coding upstream 163465 56606421 ~ 56647806 (-)
AMCG00004672 NA other downstream 39718 56283994 ~ 56384870 (-)
AMCG00004665 p3h3,LOC106605089,LOC106583419 other downstream 315503 56106713 ~ 56109085 (-)
AMCG00004660 LOC106605085 other downstream 415722 56006051 ~ 56008866 (-)
AMCG00004652 NA other downstream 530502 55889982 ~ 55894086 (-)
AMCG00004653 znf384l,LOC108433737,LOC107665159,LOC106605395 other downstream 578417 55814402 ~ 55846171 (-)
AMCG00004675 chd4,LOC107724784,LOC107671917,LOC107714608,LOC107704911 other upstream 7833 56450789 ~ 56484848 (-)
AMCG00004685 NA other upstream 170071 56613027 ~ 56752935 (-)
AMCG00004692 LOC103030083,LOC107394826,LOC101069563,LOC101467164,LOC101164413,LOC106519597,LOC108443584 other upstream 242781 56685737 ~ 56690492 (-)
AMCG00004690 NA other upstream 247763 56690719 ~ 56691706 (-)
G10115 NA other upstream 304835 56747791 ~ 56750963 (-)

Expression


Co-expression Network