AMCG00004697


Basic Information

Item Value
gene id AMCG00004697
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56856356 ~ 56858606 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004697
ACGTCACCCTATGCACAGACCAGTTTGAAGCCGCAGCCTCGCTTTCACAAGCTCTCCCCGTTGGCCAGCACTGCGACTGCGCTCTCTGGCGCCTCAGACGGGTGACGCACTTCTCCTGCGACTCTCCCACTCGCGTCGCCGCGCCGCGCTTGTTTCTGCACAGACAAGATGGCAGCGCGCAGCGGAGAGAAGCGTGCGGCCGCAGATGAGGACGAGTTCGACCCCAAGCCGGCTAAGCAGATCCGCTCCCTGCACGACCGCATGTCCCAGCGGAGGCTCGTCGTGATCCTGGAGGGGGCGACGCTGGAGACGGTCAAGGTGGGGAAGACGTTTGAGCTGCTGAACTGTGACCAACACAAGAGTATGATCCTGAAGAGCGGCAGAGAGCCGGGCCACGTCCGACCAGACATCACTCACCAGGTACTGCAGAACCCTGTGTCTGACCACCTGCCCCCTGGCTGCCCCCGCCTGGCCACCTCCCACGCCTCCACCGAGGCCACAGTGCACCCGCGTGAGCTCGTCCCGCCCCAGGGCCCCGCCGCCATCGTTGTGGGGGCCTTTGCACACGGATCGgtgGATGTGGACTACACCGAGAGGACGGTGTCCATCAGTGACTACCCCCTATCTGCCGCTCTCACCTGCTCCAAGATCTGCTCAGGGTTTGAGGAGGTCTGGGGCGtgctgtgacctctgacctcccaTTGGACAGGACAGACACTCCCCCTCTATGTGCTAGCCAATCAGCTTCGTTTTCAGGCAGTGTTTCTGTGCGTTTCCTAATTGGACAACAAAGGAATCACGTCGGGGGGGAGCTTGCTCAGCCCGGCAACTGGACGTTTTGGCGTTGGTTTGGATCTCCCGCCTCTGTGATTGGACGCAGGGAATGCACCTCATCCGGACGGCCTTCAGACTGGGCCCGACCCACCCAGCGACGGACGCTTGTGCTTCTCTGCCACTTAGTTTACATCTGGACTGTATATTGTTACATTAatctctaaataataatatttttggcCTGTTTTCTGTTGACAAATACTTTCGACTCCCAATACATTTTTACGTTCTTCCACACGTCTCTTCTTTCATTATTCTGTTCATTCTGTTCCTAAAAAGTGACAGAGGAATgtgaggagagaggggtgggtgaggtgaggagaggagagtgggAACAAGAGAAGGGGGGTAGGTCAAGGAGAAGGGGGGTGACGCAGTGGGACACAGTCAGAAAGAAGGGGTGCGTGTTTGTCATCTCTGTGCCTctacctctctctttctcctcctgtCCGTGATCAGGGCAGCCCTTCCCTACTCCTCTGAATGACCTTTATATGACCAGTTTACACTGCCAAAGCATTGACACACAGTCAAGAGGGAATCtcaa

Function

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0008168 methyltransferase activity molecular_function

KEGG:

id description
K14568 EMG1, NEP1; rRNA small subunit pseudouridine methyltransferase Nep1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004697 True 1381 mRNA 0.57 4 56856356 56858606

Neighbor

gene id symbol gene type direction distance location
AMCG00004699 NA coding downstream 3310 56846683 ~ 56853046 (-)
AMCG00004698 NA coding downstream 19422 56825021 ~ 56836934 (-)
AMCG00004689 NA coding downstream 118107 56735843 ~ 56738249 (-)
AMCG00004693 NA coding downstream 150542 56705344 ~ 56705814 (-)
AMCG00004691 NA coding downstream 153843 56698321 ~ 56702513 (-)
AMCG00004704 NA coding upstream 38997 56897603 ~ 56910267 (-)
AMCG00004706 NA coding upstream 74791 56933397 ~ 56956495 (-)
AMCG00004708 NA coding upstream 116513 56975119 ~ 56982616 (-)
AMCG00004705 NA coding upstream 178881 57037487 ~ 57050034 (-)
G10084 NA non-coding downstream 35570 56762045 ~ 56820786 (-)
G10116 NA non-coding downstream 101965 56753025 ~ 56754391 (-)
G10108 NA non-coding downstream 142168 56712389 ~ 56714188 (-)
G10093 NA non-coding downstream 208550 56606421 ~ 56647806 (-)
G10073 NA non-coding downstream 339942 56515501 ~ 56516414 (-)
G10135 NA non-coding upstream 1731 56860337 ~ 56861643 (-)
G10123 NA other downstream 64195 56788752 ~ 56792161 (-)
G10121 NA other downstream 77887 56777126 ~ 56778469 (-)
G10079 NA other downstream 80916 56772502 ~ 56775440 (-)
G10115 NA other downstream 105393 56747791 ~ 56750963 (-)
AMCG00004690 NA other downstream 164650 56690719 ~ 56691706 (-)
G10157 NA other upstream 166931 57025537 ~ 57028915 (-)

Expression


Co-expression Network