G8140


Basic Information

Item Value
gene id G8140
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 49246488 ~ 49248034 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU10023
TCAATTTCTAAATGATTTTTATTAGGAATAAATACTTTAAAGTcacagacaattaaaaaaaaaatgaactggaGTGTAAactaaaaattatatttacaatatttgtttgcGCACAGCTAGATGAATGTATACATAGTATACAGAGCAGCCAGTACAATAACATGTCTTTTGCAGTACAatgtgcaaaagaaaacaaacaaaattacaagtaATATAGGAACCATCTTTTAGATGGAAGATGTGGTCCCTccgaaccaaaaaaaaaacataacaaaaacaaacaacagcaacaacaaaagtaTGTGGTTGTAATGGGTTACAGGgttctcatttaaaatactgaGCACATACAGATGGAAACTAAGGGGTCACAATTTAAGACATATGTACAGCATTGCAATTATCATGCCTTTTtgccattgtatttatttattagcaataACTTATGTTTAATTGGCAACTGTACCAGACAGGGCTTGATATTAGCAGCTGCACTGCTGGCATTTAATATGATGAAAAAAGGACAGAGTGACGgccaaaataacatttaaacaattggaagaagaaacaaatccaAAAGAATGACCCAATTAAATGAGTGGGTAGACAATGGTGATCAACAACAGAAGTCTTCTACATTTAATATCAGAGGTAATGTTAATGAAGGGCATAAATCAAACCGGATATACTAACAGCCAAATTGGCATTGTAACAGGACTTACAGCTAGAAGGACACTTTGTTTCGTTTGAAGACTTTTAAAGGTGTGGTTAATATCGTCAAGGTTTTGTTTCTTATTCTCTTCTAGGCACATgccatttagattttttttttgcagttttgatATTGTTATTTCTGCTCATGTAGTTATCGCCACACTCTGTAGTCAGTGTTCCTCATCATCAGGGGTCACAGGCCAGCagagaatatatttgtattggtcCAATTAAGTTATGGTGGGACAGTTATGGTCAGAACTAGGGGGAGAAGAAAACCTGTGTCCATTGTGAACGAGAGCTGCGGAAAACTGCAACCAAACAGATGCAGACCAGAACAAAACCTGGATCCTCCCGTCTCTCACAGATCTCAAATATATTAGTTGATCCTGgctttttgtctgtgtttttgtttttaagttaaaatGGGAATGTGGGGggaagttttaatttgtttcaagcCTTAGTCCTCAGAAGATCTTTTATTGATAATGGCAAATTACAATATGAACATTATTATGAGGCATTATTAGGTGGTCACAAGTGCATGTACTTAGGGGTGGCGGATTAACAGTAAAATGCAAGGCCAAACAAACTATGCTGCTGCCAGGGGGTGCCCAAGCAGTGTTAAAGTTGTTGACTGGAGGGAGTGTTTTGCAGTATATAGGCATAGTCACACATATGGTCGACTGTAGTGTGTATATTGAAGAAGaactgcataaaaaataatggtaaaaaaaaaaaatatcaatgcaAAAGTATATCACTTTAAAAACACGCAGGATTGTACTACATAAGAAGACATTAGTACAGCAATCCAATATTAATTtcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10023 True 1547 lncRNA 0.35 1 49246488 49248034

Neighbor

gene id symbol gene type direction distance location
AMCG00004422 NA coding upstream 206452 49009691 ~ 49040036 (+)
AMCG00004415 NA coding upstream 399885 48830538 ~ 48846603 (+)
AMCG00004416 LOC105903796 coding upstream 603058 48629172 ~ 48643430 (+)
AMCG00004414 NA coding upstream 622336 48613149 ~ 48624152 (+)
AMCG00004404 LOC104954612 coding upstream 793791 48445728 ~ 48452697 (+)
AMCG00004426 LOC106580931 coding downstream 31126 49279160 ~ 49293068 (+)
AMCG00004428 NA coding downstream 155174 49403208 ~ 49411567 (+)
AMCG00004427 NA coding downstream 177731 49425765 ~ 49429808 (+)
AMCG00004431 NA coding downstream 271090 49519124 ~ 49522913 (+)
AMCG00004430 LOC107598122 coding downstream 299235 49547269 ~ 49571300 (+)
G8111 NA non-coding upstream 217305 49024156 ~ 49029183 (+)
G8103 NA non-coding upstream 286657 48955967 ~ 48959831 (+)
G8083 NA non-coding upstream 398362 48847526 ~ 48848126 (+)
G8044 zbtb16 non-coding upstream 777677 48463181 ~ 48468811 (+)
G7977 NA non-coding upstream 1560607 47685520 ~ 47685881 (+)
G8167 NA non-coding downstream 186009 49434043 ~ 49435751 (+)
G8188 NA non-coding downstream 334084 49582118 ~ 49586095 (+)
G8356 NA non-coding downstream 818401 50066435 ~ 50068081 (+)
G8371 NA non-coding downstream 889595 50137629 ~ 50139705 (+)
G8372 cbl,LOC107601723 non-coding downstream 895271 50143305 ~ 50144990 (+)
AMCG00004424 NA other upstream 186433 49043590 ~ 49060055 (+)
AMCG00004421 NA other upstream 220133 48897117 ~ 49026355 (+)
G8099 NA other upstream 312393 48932450 ~ 48934095 (+)
G7999 NA other upstream 1099332 48146888 ~ 48147156 (+)
AMCG00004380 NA other upstream 3278182 45962010 ~ 45968306 (+)
AMCG00004425 zbtb44,LOC106580932,LOC106612543,LOC102781915 other downstream 50702 49298736 ~ 49318835 (+)
AMCG00004442 NA other downstream 558327 49806361 ~ 49814024 (+)
AMCG00004449 NA other downstream 690518 49938552 ~ 49951533 (+)
G8377 NA other downstream 903230 50151264 ~ 50157719 (+)
AMCG00004463 NA other downstream 988643 50236677 ~ 50243043 (+)

Expression


Co-expression Network