G8167


Basic Information

Item Value
gene id G8167
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 49434043 ~ 49435751 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU10055
tagaGGTGTAAGTACTTCAAGTTccagtgcttgtgtgtgtgtgtatgtgtgcaaaattattcagttatttagtACGGTGtgtaagaaatgcataatgtgTTTCAGTTGTCAATATGGACATAACTGAACCACGTGGAAATACATTGTGATTCGATtagattcaaaacaaaaacattcctCTCAATACCCAgccctcacaaacacacaattaaactCAAGAAACCAGTTTAATTGATGAAAACTGTATTAAACTATACAAACATCAATTACAACAGATAAACGTTGTAGTTAAAATGTCCCTAATACACtataattaacaatttaatggTCACTGGATTAATCTGAAAAGGAAAGGGTTGGTAAAGGGCAGTACAGTTTACAAAATGAGAACTTTGATAAGAAGAATATACAAGCCAAGTATTCTTACAGCAAACTTTATCCTTCCTGGATACACAGTAAGAAAAAGTgctttacaattgttacaggGCAATATTTAAAAGTTCACATATATTACAAACATCAATACAACAATTATTAACTTTTTCCAGAAACTTTTTTTCAGTGTCTGAACATACTTAGTATCTGCCAACATCACACAAAAAAGACTGCATAGCAGTCAACAAATAGTTTCACAGAAATCAGATTtgactaaaaactaaaacaatttttGTTCTTCGGTTTTGGAGGACAATACCTCACACTTTTCATTGAACGTTTGCCTGGTTTAAAGTGTATGTACAAGCCCCAATcccaaatcacacaccaagttgcATTTAATGGCAGGTCATGCTATTGAGAATAGTTTTTATTGCACAGTACTTTTCATAATGCAGTAACTCGCATTGGTACAAAAACAGAGTCCTGCTGTAAAGCGTTTACTAAAAGCCAAAAGCAGCTCCGGTTTCCCTTTCCTCTTGGAAACTGCCACTTTAACCATCCTTTCTATCTTTTTGCTTATTTCAGACATTTGTATTGCCGTTGTCAGAGTAAACAACATGATGGCCCATTTCAATCTTGGCAACTGTAACTTTTGCTCTGACCTTTTTGTGTCTTTAATACCAAGGCTTCGGCAAACATAGGACCTGCTTTTGGACAGTGCCTGGATGTATTGGCAGATTTCCATGGAGAAAACTACAACTAAAAAATCATTAGCAAAACAGCTGCATTACCCATTTAAGTATAAACAGTAATTTCAGTTTAACAAGCCACAGCTGAAAAATACCAAGCTTTTAAATTTGCCTTCTGGGCTGTGGTCTTTATATTGTTCAGCAAATAACAATAGACAGTGTTGTAACATGATACAATGTGTGCATTGGAATGTCAGCATTACAAATCAAGCCCAGCAATCCTACATCTGCACATGGTTTAAACCCACTAGGTATTTTCAATGCAATACATCTGTTGTCCCAATGCCAGACCCTGCTTTGGATAgaaattcaaatatatgtaaaaacatgtattagtaatattactgttctacaaaacaataaatgcttTTTCTAGCCTCGTCTGACACATCAGGTTTGATTCCAGTTACTTCAACAACATTCTCATACTGTTATATGctgtgacacagacacaccacaCTTTAGATTGGTATAGTGATTCATGTAAGGGTTAAGTCTTTTTTCATTACAATGtagaaaattgaaaatacttatatatatacaccgatcagccataacattatgaccactgacaggtgaagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU10055 True 1709 lncRNA 0.35 1 49434043 49435751

Neighbor

gene id symbol gene type direction distance location
AMCG00004427 NA coding upstream 4235 49425765 ~ 49429808 (+)
AMCG00004428 NA coding upstream 22476 49403208 ~ 49411567 (+)
AMCG00004426 LOC106580931 coding upstream 140975 49279160 ~ 49293068 (+)
AMCG00004422 NA coding upstream 394007 49009691 ~ 49040036 (+)
AMCG00004415 NA coding upstream 587440 48830538 ~ 48846603 (+)
AMCG00004431 NA coding downstream 83373 49519124 ~ 49522913 (+)
AMCG00004430 LOC107598122 coding downstream 111518 49547269 ~ 49571300 (+)
AMCG00004434 NA coding downstream 173128 49608879 ~ 49631014 (+)
AMCG00004437 NA coding downstream 321370 49757121 ~ 49772253 (+)
AMCG00004441 dpagt1 coding downstream 361792 49797543 ~ 49804404 (+)
G8140 NA non-coding upstream 186009 49246488 ~ 49248034 (+)
G8111 NA non-coding upstream 404860 49024156 ~ 49029183 (+)
G8103 NA non-coding upstream 474212 48955967 ~ 48959831 (+)
G8083 NA non-coding upstream 585917 48847526 ~ 48848126 (+)
G8044 zbtb16 non-coding upstream 965232 48463181 ~ 48468811 (+)
G8188 NA non-coding downstream 146367 49582118 ~ 49586095 (+)
G8356 NA non-coding downstream 630684 50066435 ~ 50068081 (+)
G8371 NA non-coding downstream 701878 50137629 ~ 50139705 (+)
G8372 cbl,LOC107601723 non-coding downstream 707554 50143305 ~ 50144990 (+)
G8373 NA non-coding downstream 709620 50145371 ~ 50145823 (+)
AMCG00004425 zbtb44,LOC106580932,LOC106612543,LOC102781915 other upstream 115208 49298736 ~ 49318835 (+)
AMCG00004424 NA other upstream 373988 49043590 ~ 49060055 (+)
AMCG00004421 NA other upstream 407688 48897117 ~ 49026355 (+)
G8099 NA other upstream 499948 48932450 ~ 48934095 (+)
G7999 NA other upstream 1286887 48146888 ~ 48147156 (+)
AMCG00004442 NA other downstream 370610 49806361 ~ 49814024 (+)
AMCG00004449 NA other downstream 502801 49938552 ~ 49951533 (+)
G8377 NA other downstream 715513 50151264 ~ 50157719 (+)
AMCG00004463 NA other downstream 800926 50236677 ~ 50243043 (+)
AMCG00004477 NA other downstream 1305637 50741388 ~ 50753432 (+)

Expression


Co-expression Network