G8281


Basic Information

Item Value
gene id G8281
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 49811378 ~ 49814054 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU10228
TGTTTGAGCAataatttattatgtaaaaaaggacaaacatttcaaacaaacaatccCCCAAAAGGTTGCATACAGATGAAGCCTATCTTGGGTGACAAGTAAAATATCAACAGTTAACATAACCAAAGATTCATTATCCTAACCCCAAGTAGCTTATCTCTGCTATTCTCCTTCACAATAACGGCTCAACTTTGCATGTCAGCTGTGGTAAATCAGAAGTAGTTAACAGACCGTAATGCCTGCAGGAGTTAAATCTCTGACAGTGGaatggtatgtgtatttttgggACCCTTATAGTGTAGCACAATAGATTATACTGACCATGCTCCTCACTGTAGGCTGAATCTCACACACAGCCTATTTTATAAGCACTTAGTTGAGCTCTGTGCTGCAAAACAGTGTTTCCCAACACAGAACAGCTtaagaaacattacattttgtgcaaCTCTTACTGTGCAATCCTGGCCGATGTACAGAATTGGGTAATTCTgatgatacatttaatatttgatttttctTGTGTGATTTCTTAAATTAGACAAATTTCCAGTGATGAGTTTCAAATCAGGGGCAAAAGTTATGCATTGCGTCGAGTCTCTCCATTTggcaattaaatacaatctcACAGTTCACAAAAAAGATTCCTCTTATTTAGGTGATTGTTATCCCTGACTGTATAAAGTAAAGATTGCAAAGTTTAAGCCAGATAGGGAGCCtactgatacaatacaataaagcactatctttctttaattttgtcAGGAACATATTGCAGTGGAAAAAGTGATAGGTTTACTCCGATTACTTATTTATGATTAGATTTTTCTTGTGCCTGACTTTTCAAACATTCAGTGGCACCACACTGTTGCTCAGCACACTGCGGCTCAGGGTCGAGACACAGGCCTGACCTCTAGAGGCTGTCCAGTGTTCCTGCAACGTGACACTGTGGCAGGACAGTAAGTCACCTTGGTCTTtggttatacattttatatttaaaatgtcttggagGGGGAGTTACATAATAACAGCCAATACAGATGGAGGATATAACTTTTCAATGCTGAAAATTCAGAGTAAACCAAAGTCCTAATGCTTGTGCTGAGCATCTCCTGGGAGACAAGTGAGCCGttgtaaattaaatcagttattAAATTAAGTCAAATAATTTCCTGAATGAAAACATAGCCTAATCAATACTCCCTGAAGTTTCAAGGTATACCTACATACCAAACTAGCAACCTTTTTCAACATTAttcaaatttaatatttatcCCCTGTTGCATTCATAGGCTGccagtcattttatttgtaacgGCATTTAGAATTACAATCCAAACCTCATGTTCAATAAAAACTTGCAGTTCAGCTGCAAagttgcattacaaaaaaaaaaaaaacatttacattcccagcaaaaacacacatcacTTATGGTTTAATAAGTCGCAAACTCTCCTGATCAATTCCCTCTGCTTAGATCTATGTAAATATATGGTATCCCATTGTTAGCAAGTGCAGGTAATGTTGCAAAATAACCAATATAAAACTTAACAGTAACCCTTCATTCTGAGAATCATAAATAAGAATGTAATACACACTcctattaagttttaaaaagtcTATAATggatatttataatacattcaatatatAGGTTCCTACAACCCAGCTATTTTTAACCTATTGGACCACTTGCTCAAAAAACTTTGCTTTACAACAAGGGGGAAAAAGCCTgttgaggaaataaataaatgctacatCCTGAGAAACTCCCTACCTCCATTTTAATGGTCTTAATGACTAAGAGGAGACAGCTCCAAGATAAAGCTTTAAAACATGTATGAAGACATTCTTACACGTCACGGAGCTGGACTTCCACAGCAAACAAGTTCTCCCATACCATAATTTCATTACGTGACTGAGGCTACTGTAGACACGACAGAGCCGTGACAGGTAACAGCCAAGGCTCCCACACTGCTAATTGTGCTCCGACTGTAAACAATTTGTTGGCGTTTCTTAAGCAGCGCTGATGTCAGAAGGAGTGCCAGCTGGTGGGCCTGCACTGTAGCAGAGGTAAACCAAACCACATTCGTGGCATGAACTGTACAGAGCTGACAAGCAAAAAGACTCCCACAAAAAGCTGCCAAAAGCTACACTTGCATGGTTTGATTTTTCTGACAGCACAAAAAGCACTTGCAAACAAGGTGGCGACTTACACCTCTCACTGGAGAATAAATgcttcaattatatatttttttataatctgttttaaaaaaataatacaaaaatagaatagaaaataaataattgtgaaCTGGTATGTTGGAAGCTGGATTAATTAAGCTTTGCGTCTCATAGCTCTGCAGATGAAATGAGCAATACTGTCGGAGATGGCAGTTCCAGGCTTTTCTCAGGGTCTGATAGGCTTTCACGTTTTTACTCCTTCGAGGCCGAATGGTGACCTAACCCAGAGAGCACGTCTTCTACACCACTTCCATCCCCAGCTGTTGCGCTGTATCCTGCAGCTGCATCATCACACTGTCCCCATCCTGCGTCCCCTGCCCCGCCTCCGTGTCCGTGTCCACACTGACCATGGCCTGGGGATTGCCGCAGGCAGGGAGTGGGGCGGCCTGCGCGGGGCTGCTGGTCAGCACATAATACACCATCTCACTCTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10228 True 2677 lncRNA 0.40 1 49811378 49814054

Neighbor

gene id symbol gene type direction distance location
AMCG00004444 NA coding downstream 15194 49775924 ~ 49796184 (-)
AMCG00004440 NA coding downstream 39100 49768277 ~ 49772278 (-)
AMCG00004439 LOC103368493 coding downstream 58262 49746828 ~ 49753116 (-)
AMCG00004438 NA coding downstream 147523 49636642 ~ 49663855 (-)
AMCG00004436 NA coding downstream 208031 49602154 ~ 49603347 (-)
AMCG00004446 NA coding upstream 6501 49820555 ~ 49822910 (-)
AMCG00004445 NA coding upstream 17145 49831199 ~ 49833740 (-)
AMCG00004447 NA coding upstream 25481 49839535 ~ 49841520 (-)
AMCG00004456 c1qtnf5 coding upstream 228205 50042259 ~ 50048074 (-)
AMCG00004460 cbl coding upstream 330656 50144710 ~ 50157745 (-)
G8133 NA non-coding downstream 709466 49101708 ~ 49101912 (-)
G8118 NA non-coding downstream 763305 48977624 ~ 49048073 (-)
G8116 NA non-coding downstream 854915 48955376 ~ 48956463 (-)
G7979 NA non-coding downstream 2124811 47685925 ~ 47686567 (-)
G7978 NA non-coding downstream 2125504 47685631 ~ 47685874 (-)
G8286 NA non-coding upstream 30528 49844582 ~ 49858455 (-)
G8307 NA non-coding upstream 130244 49944298 ~ 49945808 (-)
G8308 NA non-coding upstream 133829 49947883 ~ 49948531 (-)
G8309 NA non-coding upstream 136796 49950850 ~ 49951534 (-)
G8335 NA non-coding upstream 170451 49984505 ~ 49988218 (-)
AMCG00004429 NA other downstream 386196 49411207 ~ 49425182 (-)
AMCG00004420 NA other downstream 826067 48940024 ~ 48985311 (-)
AMCG00004412 zbtb16,zbtb16a,LOC107703518 other downstream 1330663 48463181 ~ 48480715 (-)
AMCG00004403 cadm1a,LOC107548188,LOC107715321 other downstream 2504789 47048124 ~ 47306589 (-)
AMCG00004398 anc13,anapc13,LOC107756075,LOC107693524 other downstream 2923624 46883292 ~ 46887754 (-)
G8310 NA other upstream 134807 49948861 ~ 49949592 (-)
G8340 NA other upstream 191078 50005132 ~ 50008694 (-)
AMCG00004457 rnf26 other upstream 252344 50066398 ~ 50071941 (-)
AMCG00004467 trappc4,LOC106612982,LOC107561742 other upstream 395929 50209983 ~ 50225826 (-)
G8501 NA other upstream 857012 50671066 ~ 50673375 (-)

Expression


Co-expression Network