G8307


Basic Information

Item Value
gene id G8307
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 49944298 ~ 49945808 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU10256
CTGAAATACATAGTTTACATGTCAGCAGAATAACCTTACACTAACACCAAGCATGACTATGAGCTCTCTGCACTCACTTCAGGCTGCGTGTGCGCATCAGCACTGGGCCCAGCATCTCCAGCAGCTCCTGGGTCAGGTGGCAGGAGGAAAGATTCAGCTCCTCCAGCAGGTGCCTGGAGGGTGCGCTGCTGAGTACAGAGCGCAGCACGAAGCACTTGAGGGGAGTCATGCACACTGTGGACAGGTTGAGGGACTTGAGGGAACAGAGCACCTCGGCTGTGAAGTGTGGGTTCTGGAACTCGTAGAGGAAGAATAGCAGATCCATCACTTCCTCTGGGGGCTGGtgcttctgtctgtctttcaccATGTGCTTCTCCAGGGAGCGGGTGATCTGAGCCACTACCGTGCTCTTAATGGTGCAACCCAGCTGGTCCAGCAGCACCCTGTTCCCGTAGGACAGGAGGCCGCCCATAAAGACAGGATAGAGCTCGAAGGACTCCCGCTCCTGCCGCTCCTTTGGCTTTGGACCCTGGACCCCCAGCAGGCTCTGCTCAATCTGGTCCAGCACATCCTCGTTGAACTGGTCCTCTGTGCGGAACATTTCGGCCGTCATGGTGCGTGCAATCCGGCCCTTGCCGTACCCGATGATGCGGTGGTACAGACTGGGAAACATCTTGACTAGGTTAAAGATGGCAAAGATCCTCAGGGGGAGGAATTTGGAAAGGATGTTGAGCAGGGTGGTCAGGTCTTCCCCGGCCTGCCCAATGGCCTCAGAGGCTTGCTTGCCCACCTTCTCCAGCACCGTCTTCTTCTCCCCCAGCACGACATACAGGGCAGCCAGGTACTCCTGCATGGCCGGGACAGCGAACACGTAGCGcgtctcccctcccccctcctccaggTTGGAGGTCTCCATGCACGGCACGAGGAAGAAATCCAGGACGTCTGTGCGGAATACCGCCAGCTGTCGGAGCTCCTCATCTGTCTTGGTCTTGCCGCCAATCCACTGCTCCAATTCCTTCTCCGAGAAGGAGGTGCGCTTGTTGGTGACTCCATCGTACGCCAGCTTGCCCACTGTCTGAACCACGTGGTGCACCAGGGAGGTGCTCTGCTGTCCAACTTTGTCGCCCCCTCCTCCAAACCTATTGCTACCCTCCAGGACCTCTCCACTGAAGTTAAGCCTCAGGAAGCTGGTGAAGATGCCGGTGAGGGTGCGGATATGAGCTAGGGGATCAGTGAAGTGGAGGAAGTGCAATGTCGCACAGGTCAGCCAACAGTAGGACGGCAGGAAGCAGGCAGCGGCCAGCTGGCTTTCACGTTCTAGATTGAGGTACAACATCTCCAGCAGGGTCTCTGTCTCCTGGCTGGGTGGCCCACTGCTGCCATGTAGCAACCGGCTAGTAAAGTACGCCTTCTGCTGGTCAAGGTTGCTAAAACCACAGATCTGAAAGTAGCGGTCTGTGTACTTGTTGGGGATGCTGTCCAAGGCGGAGAGCCGGGTGGTGACCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10256 True 1511 lncRNA 0.57 1 49944298 49945808

Neighbor

gene id symbol gene type direction distance location
AMCG00004447 NA coding downstream 102778 49839535 ~ 49841520 (-)
AMCG00004445 NA coding downstream 110558 49831199 ~ 49833740 (-)
AMCG00004446 NA coding downstream 121388 49820555 ~ 49822910 (-)
AMCG00004444 NA coding downstream 148114 49775924 ~ 49796184 (-)
AMCG00004440 NA coding downstream 172020 49768277 ~ 49772278 (-)
AMCG00004456 c1qtnf5 coding upstream 96451 50042259 ~ 50048074 (-)
AMCG00004460 cbl coding upstream 198902 50144710 ~ 50157745 (-)
AMCG00004461 cbl,LOC102793573 coding upstream 224268 50170076 ~ 50182056 (-)
AMCG00004465 NA coding upstream 242884 50188692 ~ 50197647 (-)
AMCG00004466 NA coding upstream 285466 50231274 ~ 50234343 (-)
G8286 NA non-coding downstream 85843 49844582 ~ 49858455 (-)
G8281 NA non-coding downstream 130244 49811378 ~ 49814054 (-)
G8133 NA non-coding downstream 842386 49101708 ~ 49101912 (-)
G8118 NA non-coding downstream 896225 48977624 ~ 49048073 (-)
G8116 NA non-coding downstream 987835 48955376 ~ 48956463 (-)
G8308 NA non-coding upstream 2075 49947883 ~ 49948531 (-)
G8309 NA non-coding upstream 5042 49950850 ~ 49951534 (-)
G8335 NA non-coding upstream 38697 49984505 ~ 49988218 (-)
G8338 NA non-coding upstream 43464 49989272 ~ 49989482 (-)
G8341 kmt2a,LOC107601691 non-coding upstream 63972 50009780 ~ 50010015 (-)
AMCG00004429 NA other downstream 519116 49411207 ~ 49425182 (-)
AMCG00004420 NA other downstream 958987 48940024 ~ 48985311 (-)
AMCG00004412 zbtb16,zbtb16a,LOC107703518 other downstream 1463583 48463181 ~ 48480715 (-)
AMCG00004403 cadm1a,LOC107548188,LOC107715321 other downstream 2637709 47048124 ~ 47306589 (-)
AMCG00004398 anc13,anapc13,LOC107756075,LOC107693524 other downstream 3056544 46883292 ~ 46887754 (-)
G8310 NA other upstream 3053 49948861 ~ 49949592 (-)
G8340 NA other upstream 59324 50005132 ~ 50008694 (-)
AMCG00004457 rnf26 other upstream 120590 50066398 ~ 50071941 (-)
AMCG00004467 trappc4,LOC106612982,LOC107561742 other upstream 264175 50209983 ~ 50225826 (-)
G8501 NA other upstream 725258 50671066 ~ 50673375 (-)

Expression


Co-expression Network