Gene
RNA
| Item | Value |
|---|---|
| gene id | G8338 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 49989272 ~ 49989482 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU10291 | True | 211 | lncRNA | 0.72 | 1 | 49989272 | 49989482 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004447 | NA | coding | downstream | 147752 | 49839535 ~ 49841520 (-) |
| AMCG00004445 | NA | coding | downstream | 155532 | 49831199 ~ 49833740 (-) |
| AMCG00004446 | NA | coding | downstream | 166362 | 49820555 ~ 49822910 (-) |
| AMCG00004444 | NA | coding | downstream | 193088 | 49775924 ~ 49796184 (-) |
| AMCG00004440 | NA | coding | downstream | 216994 | 49768277 ~ 49772278 (-) |
| AMCG00004456 | c1qtnf5 | coding | upstream | 52777 | 50042259 ~ 50048074 (-) |
| AMCG00004460 | cbl | coding | upstream | 155228 | 50144710 ~ 50157745 (-) |
| AMCG00004461 | cbl,LOC102793573 | coding | upstream | 180594 | 50170076 ~ 50182056 (-) |
| AMCG00004465 | NA | coding | upstream | 199210 | 50188692 ~ 50197647 (-) |
| AMCG00004466 | NA | coding | upstream | 241792 | 50231274 ~ 50234343 (-) |
| G8335 | NA | non-coding | downstream | 1054 | 49984505 ~ 49988218 (-) |
| G8309 | NA | non-coding | downstream | 37738 | 49950850 ~ 49951534 (-) |
| G8308 | NA | non-coding | downstream | 40741 | 49947883 ~ 49948531 (-) |
| G8307 | NA | non-coding | downstream | 43464 | 49944298 ~ 49945808 (-) |
| G8286 | NA | non-coding | downstream | 130817 | 49844582 ~ 49858455 (-) |
| G8341 | kmt2a,LOC107601691 | non-coding | upstream | 20298 | 50009780 ~ 50010015 (-) |
| G8342 | NA | non-coding | upstream | 21434 | 50010916 ~ 50011421 (-) |
| G8343 | LOC107718271,LOC107690455,LOC107585544 | non-coding | upstream | 23662 | 50013144 ~ 50013381 (-) |
| G8345 | NA | non-coding | upstream | 24908 | 50014390 ~ 50014752 (-) |
| G8346 | NA | non-coding | upstream | 26057 | 50015539 ~ 50015785 (-) |
| G8310 | NA | other | downstream | 39680 | 49948861 ~ 49949592 (-) |
| AMCG00004429 | NA | other | downstream | 564090 | 49411207 ~ 49425182 (-) |
| AMCG00004420 | NA | other | downstream | 1003961 | 48940024 ~ 48985311 (-) |
| AMCG00004412 | zbtb16,zbtb16a,LOC107703518 | other | downstream | 1508557 | 48463181 ~ 48480715 (-) |
| AMCG00004403 | cadm1a,LOC107548188,LOC107715321 | other | downstream | 2682683 | 47048124 ~ 47306589 (-) |
| G8340 | NA | other | upstream | 15650 | 50005132 ~ 50008694 (-) |
| AMCG00004457 | rnf26 | other | upstream | 76916 | 50066398 ~ 50071941 (-) |
| AMCG00004467 | trappc4,LOC106612982,LOC107561742 | other | upstream | 220501 | 50209983 ~ 50225826 (-) |
| G8501 | NA | other | upstream | 681584 | 50671066 ~ 50673375 (-) |
| AMCG00004480 | LOC107565095,LOC104942062,LOC107576893 | other | upstream | 721357 | 50710839 ~ 50720925 (-) |
