G8340


Basic Information

Item Value
gene id G8340
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 50005132 ~ 50008694 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU10293
CTGTGCTTTAGGCTGGTCTGCCGTCTTAAAGGACTTGCTTTTCTCAATCTTAAACAACTGAGCTTTTGCTTTCTTTAGCAGGCCAGCAACCTTCCTGTCTGACACCTGCTGCTTCTGTGCCTGGGCGAGCATGGATCCCAAGGAGTGCGTGGAGGGCTGTTTGCTGGGAGGTCCTGGCTGGgggctgtgctgggttggggcTGTTGTCTGAGGATGagctttctccttctccttctccttctcccctgTCTCAGACTCTTGGCCCTTCTCTGCTGGTCTGCCTTTTTTGGACAGGCGGCTCTTGTTGCTGGGGGTAACGGTGCTTGCCTGGTTCACACCCTCCACAGACCCCAGAGAAGGAGAAGTTTCAGCAGCGGGGTCAACAGAGATGGATTTCTTCCTGCCAGGGGTCTTCTTTGGGGCAGGGGTTGTGACAGCTTCTTCACTTTCTTTCCCATCTATTGAGAAGAGGCTGGGGGTAGGGGTGGAGGCTTCCATACCTGTTCCCTTTCCTCTTCTCTCCCGCTCCTTCCGAGTgtcttttttattctctttctctctgtccctggGTCTCTCaggttctctctctttctctttggaGGCTGTCTCCCGGGTTACTGAGACGCTTCTCTCCCTGGCTCCTTTCCCTGCTCCTCCGGGTGCCTGGGGGCTGGAGGCGAAGAGAGGGAAAAGAGGGGATGAGGATGAAGAGCtgcctcccacccccacccctgagGAGAAGGAATCTCCTGCCCCTCCCAAGCCTCCAGCCTGTCTCCTGCTTGACTGGTAAGAGTCTGGGGTCCCCTCGGTTGGGAGAGTCATTGAGCCTGGTGAGAAGGTACTGAACGGAGCTGGAGTTAAGGCACTGGTGGCTAGAGGACTGACGGCAACACCTGGCAAGGAGCTGGAGATGCTGACCGTGCTTGCTGAGGCAGAAGTCGCCAACGGGGAGAGATCAGATGGGGCCTTGCCTGCCTGGGCCCCTGACTGGCTGCTTCGGGTGGTCATGGAGTGTGACGGTGACCTGGGTTGGCCTCGCAAGGGGCCGAACACTCTCCTCGCCTTACGGCGAGGGGTTCTGCCAGTGGGGGATGAGAGCTGCAGAGTGGAGGACAGGGAGCCCGGGCTACCCCCCGAGGAAGTAGGGAGGGTAACAGACTCATAGATACGGGAGTGTTCCTCGCTGGGGGTGAAGCGGGGGGCTCGGAGCAAGGGGCTGCGCTTGTGAAGTGGGGCCTCGAAGCGGGAGGAAGGAAGTTcgtgctggtggtggtggggatgCAACGAAGGGAAGAGGCGGTTGCCAGCTCCTGCCGCCCCTCCGGGGGCGGAGAAACCCCCAGCAGCACCCCCGcctccccctccaccacctGCTCCAGCACCGGAGCTGGGGGGCACAAGGCCCACATCTTCAGGGGTGAGAGGGGGTGGCCTGAAGTTGTCAAAGATGGGTTTGCGAATAAGGCCCTCCTTGGCATACTTGGCAGAGGAGAAGTACTGCTGGTCCGAGCGGGACAGTGAGGTCCAGCGAAAAGTAGGTTCCCTCAGAATGGACCGTCGCTTCTCCTGCAGAGGGGACATCACAGAAGGAGCAGAGATGAAAGGAGCAATGGGGTGGGGAACAATCCATGGGGAATGAGAATGGTGATCCCCAATGGCAGCCGTGGTGTTGGAGGCTGGCTGGGTGGGCTGAGGCGGCAGTGGGGaggtgaggagagaggggggtgggggagaggaggaagaagaggctGTAGAGGAAGCTTGTTGTGACCCTGCCTGAGACGAGGATGTCAACAGCCCTCCTGTGACAGCACTGGAGAGTCCTGTTTTCTTTCCTCCACTGGCCGAGCTACTGCCAGCGCTTGCCACCAACGTCCCTCTCCCAATCCCTTGTCCCCGGCGACCCCTTCTGCTCCTCTCCATCGGCACCACGTGCTCAGGTTCAGATGGGGGGGATGGCGGCCGGGAGATGTGACCGGTCTCCCTGTCACCCTGGGAAGATGGGGATTGGTCTGGCTCTTCAGATAGAGGTGGGGTGCCCTCAGAGGCCTGGGAGTCACTAGATGAATCCAGGCTAGGGCTGCTGGAACGGGAGGACTCCCCCGATGTGTTCTGGGATGAATGCTGGGACACGGCACTGGAGCCACAAGATGCCGTGCTGCTGCTGAAGCGCCCGTTGCTCGTGCTGTTGTtgcagctgctgttgttgttgagcAGGCTGGCTGCGGCTGCTGCCACGTTCGCACTaaggggtggaggagggggcaGTAGAGGGGTGCCGATTGATGCTACAGCCCCAACAGAAGCAGCAGGGCAGGCAGCAGCAGTCGACACGGGAATAGAAGTAGAGGAGGAGGGTGGAGAGGCCACTGTAGTAGGGACAGGTTCCAGTCTGGGCATCTTCAGGTGTGGTGGAGGGTTGCCAAAGCTGGCCTCATCCTCAATGAAGCGCTTGGGCGTCTTGATGATCCGCCTGGAGACTGTGCTCACCACAGGCATGATGAACTGCCGGATATTCTTCAGCTGCGTCCTCCTCCGCCTCCGGATGCCCGACTCCATTCCAGAAGGTCCCTGGCTGCTGATCACTGCCTCCTTCTCCagcattttcttcttctgtgcTCCTTTCTTGGCacgctgcagcagctgcttggCGATCGTGGCATCGGGCCGCTTGGAAGGGGGGACGATGCGTACTGGTTTGATGCGCCTAGGGCTCTGCCGCACCCCCACTGCCATGCCTGTCCGGGAAGGAGAGGTGGGCAGCAAAGGGGAGGAGTTGTGGGGGCTGGAACTGGCGCCTGTGAGGAGATCGTCAGCTTGCGAATCCCTGTGCTTGAGGTGGTGAGGAGTGTGAGGGGCTGGATCTCTCTCTCGTCGATCCCTGATAGCTTTCTGTTTCAGAGACGCAGCTTCAATCATAGCCATCTGAGGGGCCGAGGAAGCAGAGGCCAGAGCGGCGGCTGCTGCCGCAGCTTCAGCTTTCAGGCGCTCCGCAGAAGGTGGCCTGCCACGCCTTCGCCTTGGCACCACAGGAACCGGGACTCCCTTCCTTCCGATCACCTTGAGCCGAGCCTTGAGGGGAGCCAGTTTAACAGCTCGCAGCCGCTTGATTTTGGTTATCTTTGAGATGCGACCCATCTTGGGCATCTTTGATAGCTTACTAACgccatgctgctgctgctgctgctgctgctgctgcatggACCCGAGGGGTGTCCGTTTCGCcgcctttctttctttctcatcgTCTGGTGACTCTTTTCGGGGGCCCGAgcctgtgctgtgctgctgtgaagACTCCCGCTTGTCTTCTACTCTGGCCTGGTTCCTCTGCTGCCAGGCCCTGTGGCTCCCCGATGCTGGAGGACGGCCTCGCCTCTTCTCCCCCGAGCCAGGGGGCCTCCCCGGTGGTCTCTTGACTTTCTCTGGTGGCCGGCTGGGGCCCTCTGGTTTGCAGTGGGGAGAGGTAGCTGGTGACGGAGAGGAGTCAATCACTGTAGCTGCTCTCTGCGGAGTCAAGGCCCTGGGAGGACGGCCTCTGGGCTTTCTTTCCTGGCGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10293 True 3563 TUCP 0.60 1 50005132 50008694

Neighbor

gene id symbol gene type direction distance location
AMCG00004447 NA coding downstream 163612 49839535 ~ 49841520 (-)
AMCG00004445 NA coding downstream 171392 49831199 ~ 49833740 (-)
AMCG00004446 NA coding downstream 182222 49820555 ~ 49822910 (-)
AMCG00004444 NA coding downstream 208948 49775924 ~ 49796184 (-)
AMCG00004440 NA coding downstream 232854 49768277 ~ 49772278 (-)
AMCG00004456 c1qtnf5 coding upstream 33565 50042259 ~ 50048074 (-)
AMCG00004460 cbl coding upstream 136016 50144710 ~ 50157745 (-)
AMCG00004461 cbl,LOC102793573 coding upstream 161382 50170076 ~ 50182056 (-)
AMCG00004465 NA coding upstream 179998 50188692 ~ 50197647 (-)
AMCG00004466 NA coding upstream 222580 50231274 ~ 50234343 (-)
G8338 NA non-coding downstream 15650 49989272 ~ 49989482 (-)
G8335 NA non-coding downstream 16914 49984505 ~ 49988218 (-)
G8309 NA non-coding downstream 53598 49950850 ~ 49951534 (-)
G8308 NA non-coding downstream 56601 49947883 ~ 49948531 (-)
G8307 NA non-coding downstream 59324 49944298 ~ 49945808 (-)
G8341 kmt2a,LOC107601691 non-coding upstream 1086 50009780 ~ 50010015 (-)
G8342 NA non-coding upstream 2222 50010916 ~ 50011421 (-)
G8343 LOC107718271,LOC107690455,LOC107585544 non-coding upstream 4450 50013144 ~ 50013381 (-)
G8345 NA non-coding upstream 5696 50014390 ~ 50014752 (-)
G8346 NA non-coding upstream 6845 50015539 ~ 50015785 (-)
G8310 NA other downstream 55540 49948861 ~ 49949592 (-)
AMCG00004429 NA other downstream 579950 49411207 ~ 49425182 (-)
AMCG00004420 NA other downstream 1019821 48940024 ~ 48985311 (-)
AMCG00004412 zbtb16,zbtb16a,LOC107703518 other downstream 1524417 48463181 ~ 48480715 (-)
AMCG00004403 cadm1a,LOC107548188,LOC107715321 other downstream 2698543 47048124 ~ 47306589 (-)
AMCG00004457 rnf26 other upstream 57704 50066398 ~ 50071941 (-)
AMCG00004467 trappc4,LOC106612982,LOC107561742 other upstream 201289 50209983 ~ 50225826 (-)
G8501 NA other upstream 662372 50671066 ~ 50673375 (-)
AMCG00004480 LOC107565095,LOC104942062,LOC107576893 other upstream 702145 50710839 ~ 50720925 (-)
G8542 foxred1 other upstream 715173 50723867 ~ 50725353 (-)

Expression


Co-expression Network