Gene
RNA
| Item | Value |
|---|---|
| gene id | G8341 |
| gene name | kmt2a,LOC107601691 |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 50009780 ~ 50010015 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| kmt2a | Predicted to enable histone methyltransferase activity (H3-K4 specific). Acts upstream of or within glial cell development; nucleate erythrocyte development; and paraxial mesoderm development. Predicted to be located in nucleus. Predicted to be part of histone methyltransferase complex. Is expressed in several structures, including blastoderm; blastodisc; intermediate cell mass of mesoderm; nervous system; and renal system. Human ortholog(s) of this gene implicated in acute myeloid leukemia; cervical cancer; mixed phenotype acute leukemia; and non-Hodgkin lymphoma. Orthologous to human KMT2A (lysine methyltransferase 2A). |
| description |
|---|
| PREDICTED: histone-lysine N-methyltransferase 2A isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU10294 | True | 236 | lncRNA | 0.61 | 1 | 50009780 | 50010015 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004447 | NA | coding | downstream | 168260 | 49839535 ~ 49841520 (-) |
| AMCG00004445 | NA | coding | downstream | 176040 | 49831199 ~ 49833740 (-) |
| AMCG00004446 | NA | coding | downstream | 186870 | 49820555 ~ 49822910 (-) |
| AMCG00004444 | NA | coding | downstream | 213596 | 49775924 ~ 49796184 (-) |
| AMCG00004440 | NA | coding | downstream | 237502 | 49768277 ~ 49772278 (-) |
| AMCG00004456 | c1qtnf5 | coding | upstream | 32244 | 50042259 ~ 50048074 (-) |
| AMCG00004460 | cbl | coding | upstream | 134695 | 50144710 ~ 50157745 (-) |
| AMCG00004461 | cbl,LOC102793573 | coding | upstream | 160061 | 50170076 ~ 50182056 (-) |
| AMCG00004465 | NA | coding | upstream | 178677 | 50188692 ~ 50197647 (-) |
| AMCG00004466 | NA | coding | upstream | 221259 | 50231274 ~ 50234343 (-) |
| G8338 | NA | non-coding | downstream | 20298 | 49989272 ~ 49989482 (-) |
| G8335 | NA | non-coding | downstream | 21562 | 49984505 ~ 49988218 (-) |
| G8309 | NA | non-coding | downstream | 58246 | 49950850 ~ 49951534 (-) |
| G8308 | NA | non-coding | downstream | 61249 | 49947883 ~ 49948531 (-) |
| G8307 | NA | non-coding | downstream | 63972 | 49944298 ~ 49945808 (-) |
| G8342 | NA | non-coding | upstream | 901 | 50010916 ~ 50011421 (-) |
| G8343 | LOC107718271,LOC107690455,LOC107585544 | non-coding | upstream | 3129 | 50013144 ~ 50013381 (-) |
| G8345 | NA | non-coding | upstream | 4375 | 50014390 ~ 50014752 (-) |
| G8346 | NA | non-coding | upstream | 5524 | 50015539 ~ 50015785 (-) |
| G8347 | NA | non-coding | upstream | 9809 | 50019824 ~ 50020024 (-) |
| G8340 | NA | other | downstream | 1086 | 50005132 ~ 50008694 (-) |
| G8310 | NA | other | downstream | 60188 | 49948861 ~ 49949592 (-) |
| AMCG00004429 | NA | other | downstream | 584598 | 49411207 ~ 49425182 (-) |
| AMCG00004420 | NA | other | downstream | 1024469 | 48940024 ~ 48985311 (-) |
| AMCG00004412 | zbtb16,zbtb16a,LOC107703518 | other | downstream | 1529065 | 48463181 ~ 48480715 (-) |
| AMCG00004457 | rnf26 | other | upstream | 56383 | 50066398 ~ 50071941 (-) |
| AMCG00004467 | trappc4,LOC106612982,LOC107561742 | other | upstream | 199968 | 50209983 ~ 50225826 (-) |
| G8501 | NA | other | upstream | 661051 | 50671066 ~ 50673375 (-) |
| AMCG00004480 | LOC107565095,LOC104942062,LOC107576893 | other | upstream | 700824 | 50710839 ~ 50720925 (-) |
| G8542 | foxred1 | other | upstream | 713852 | 50723867 ~ 50725353 (-) |
