Gene
RNA
| Item | Value |
|---|---|
| gene id | G8343 |
| gene name | LOC107718271,LOC107690455,LOC107585544 |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 50013144 ~ 50013381 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: histone-lysine N-methyltransferase 2A-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU10296 | True | 238 | lncRNA | 0.48 | 1 | 50013144 | 50013381 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004447 | NA | coding | downstream | 171624 | 49839535 ~ 49841520 (-) |
| AMCG00004445 | NA | coding | downstream | 179404 | 49831199 ~ 49833740 (-) |
| AMCG00004446 | NA | coding | downstream | 190234 | 49820555 ~ 49822910 (-) |
| AMCG00004444 | NA | coding | downstream | 216960 | 49775924 ~ 49796184 (-) |
| AMCG00004440 | NA | coding | downstream | 240866 | 49768277 ~ 49772278 (-) |
| AMCG00004456 | c1qtnf5 | coding | upstream | 28878 | 50042259 ~ 50048074 (-) |
| AMCG00004460 | cbl | coding | upstream | 131329 | 50144710 ~ 50157745 (-) |
| AMCG00004461 | cbl,LOC102793573 | coding | upstream | 156695 | 50170076 ~ 50182056 (-) |
| AMCG00004465 | NA | coding | upstream | 175311 | 50188692 ~ 50197647 (-) |
| AMCG00004466 | NA | coding | upstream | 217893 | 50231274 ~ 50234343 (-) |
| G8342 | NA | non-coding | downstream | 1723 | 50010916 ~ 50011421 (-) |
| G8341 | kmt2a,LOC107601691 | non-coding | downstream | 3129 | 50009780 ~ 50010015 (-) |
| G8338 | NA | non-coding | downstream | 23662 | 49989272 ~ 49989482 (-) |
| G8335 | NA | non-coding | downstream | 24926 | 49984505 ~ 49988218 (-) |
| G8309 | NA | non-coding | downstream | 61610 | 49950850 ~ 49951534 (-) |
| G8345 | NA | non-coding | upstream | 1009 | 50014390 ~ 50014752 (-) |
| G8346 | NA | non-coding | upstream | 2158 | 50015539 ~ 50015785 (-) |
| G8347 | NA | non-coding | upstream | 6443 | 50019824 ~ 50020024 (-) |
| G8350 | NA | non-coding | upstream | 20015 | 50033396 ~ 50038355 (-) |
| G8370 | NA | non-coding | upstream | 114391 | 50127772 ~ 50135731 (-) |
| G8340 | NA | other | downstream | 4450 | 50005132 ~ 50008694 (-) |
| G8310 | NA | other | downstream | 63552 | 49948861 ~ 49949592 (-) |
| AMCG00004429 | NA | other | downstream | 587962 | 49411207 ~ 49425182 (-) |
| AMCG00004420 | NA | other | downstream | 1027833 | 48940024 ~ 48985311 (-) |
| AMCG00004412 | zbtb16,zbtb16a,LOC107703518 | other | downstream | 1532429 | 48463181 ~ 48480715 (-) |
| AMCG00004457 | rnf26 | other | upstream | 53017 | 50066398 ~ 50071941 (-) |
| AMCG00004467 | trappc4,LOC106612982,LOC107561742 | other | upstream | 196602 | 50209983 ~ 50225826 (-) |
| G8501 | NA | other | upstream | 657685 | 50671066 ~ 50673375 (-) |
| AMCG00004480 | LOC107565095,LOC104942062,LOC107576893 | other | upstream | 697458 | 50710839 ~ 50720925 (-) |
| G8542 | foxred1 | other | upstream | 710486 | 50723867 ~ 50725353 (-) |
