G8500


Basic Information

Item Value
gene id G8500
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 50668946 ~ 50674553 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU10486
tgcatttcCTGACACTGGTTGTGTGTTTGGCACCTCATTGTGGTAGGATTTAAAACCGtagcacaaaaaaagaaacaaaaaaagtgaataaatgaTAGGAGACAGATTCTAGGACACAATAAATGAAGTCTGAGAGAGGATTTGGCATGTGTAACCATCAGGAATGTTCAAAATTTGCTCCTACTTAGAggtgcctttttatttttcaaAATGTTGAAGCAGAAGTACACCATCGTGTCGGTACTTCTCAGTCCTGAATCGAAGTACTTTGTATCCATAAGAGTAAAAATACCTTCAGGCACTGTAATggtaaatacaaaaacacttcCCACCGAGACTTTCAGGTGCACCTCCACACAGTGGCAAGTTCACCACAGCACTTCAATCTGCATGTCACTCACGGCTTTCTCACACAAATCAACagcattccagtgtctgtttatttgatttagttttggtatttgttttacctccctttaattaattataggGAGTGTTGGTTAAATAAAATAGGTACCACTAAACCGCTGAATACTGGCTTGCTGGAAAAAAGCACGTAGTTCAAGAGAGAAGGGCACACATTTATTCTCATTCACATGGTACTGTATAGTTGCAGCTGCAAACAGTGCTATGTGAACCTTGAAAAGGAGTAGCAgtcaaccatttaaaatgtttacattcagGAATAAAAGTTGTACAATCTCATTTTAACTAAAAAGGGCACACAATTAAGAATGAGTACACAATGTAGCATTAAATTGCCCATCTCATTAATATAGTGTTTGGGTTCGCTAACAAGTTGCATGTTTAGCACCTGCAAATAAAAGTGAATGAGATGATACTGTAGCTTGTGACCGCCTTTACTAGTGCAGACCTTCATCGCTGTTCACCTGTGCAGTGCTGTCAGGTGAAGTCCGGACATCTTCTCTTTTTTATAAGAAATAAGAacgtcattttttaaaaacattatttttacaaaagtaGTAAGAAACAACTGAGCTTACGTTTGCTGGGGTGAGATTTGAACACATCTATATTTGCAGAAAAAGAGTTTCAAACTTTACATGATAgcttaattgaaaaaaaaaaaaaaagggaagtatgtagtatttcaaacaaaagtaaaaactgcCAGTCAGACTTTGAAAAAATGGTtaagatttcaaaatgtatccACGGCTTACATTCCACCTTTtgtcaaaatacacacattgttattgttatgtttcTGTACAATATGTCATAATTTCATAACATCTCCATTTCCAGTTTGAATAATGTGagcaaaataaagcaacaaaaccaacaaaacataATCATGGAAGCACCAAAAGCAGTTTCCTTTTCCTGTTCATTGGTCAGGAGAGGGACTGTGTTCGGGACACCGAGCAATTTCTCCCTCATTTCCCTTTATTATCCTGGAAAAGCTGAGGAGTGGAATGTCAAGAAGCATCTTTTTTCCATGCCTTTTTCTGCTTGCCTGACACGgttcaacagaaaaacaagagcTTTGGGtttctagtaaaaaaaaaagtcttaaaacaaacactgcaaaaGAAACCAGATAAAAAACGCCCATCTACACAGAGATGGAGCCGTCTCTGAAGTTGGTTTTCCCGATTAAAACGTTGAGCAAGATCGCTTGGCCCTGGCGGCTCTCCTGCTGGGCCTTCTTTATGATGTCATCTAGCCTGCCCTCGTCCTCTCGGCCAATCAGGTAGCCCTTCCCTCCGTAACCGTCCGCTACCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10486 True 1750 lncRNA 0.42 2 50668946 50674553

Neighbor

gene id symbol gene type direction distance location
AMCG00004475 NA coding downstream 8610 50640186 ~ 50660336 (-)
AMCG00004471 NA coding downstream 378207 50289942 ~ 50290739 (-)
AMCG00004470 NA coding downstream 382958 50281745 ~ 50285988 (-)
AMCG00004466 NA coding downstream 434603 50231274 ~ 50234343 (-)
AMCG00004465 NA coding downstream 471299 50188692 ~ 50197647 (-)
AMCG00004483 kcnj5,LOC107725067,LOC107709561,LOC107558569,LOC106581095 coding upstream 141169 50815722 ~ 50838107 (-)
AMCG00004484 fli1,LOC106612965,LOC103145351 coding upstream 183393 50857946 ~ 50878635 (-)
AMCG00004487 LOC100136491 coding upstream 346785 51021338 ~ 51025994 (-)
AMCG00004492 NA coding upstream 804237 51478790 ~ 51484432 (-)
AMCG00004491 LOC100195238 coding upstream 829915 51504468 ~ 51508828 (-)
G8370 NA non-coding downstream 533215 50127772 ~ 50135731 (-)
G8350 NA non-coding downstream 630591 50033396 ~ 50038355 (-)
G8347 NA non-coding downstream 648922 50019824 ~ 50020024 (-)
G8346 NA non-coding downstream 653161 50015539 ~ 50015785 (-)
G8345 NA non-coding downstream 654194 50014390 ~ 50014752 (-)
G8505 NA non-coding upstream 7077 50681630 ~ 50681962 (-)
G8524 NA non-coding upstream 20021 50694574 ~ 50694803 (-)
G8541 NA non-coding upstream 46626 50721179 ~ 50722312 (-)
G8550 NA non-coding upstream 74465 50749018 ~ 50752724 (-)
G8552 NA non-coding upstream 80840 50755393 ~ 50756726 (-)
AMCG00004467 trappc4,LOC106612982,LOC107561742 other downstream 443120 50209983 ~ 50225826 (-)
AMCG00004457 rnf26 other downstream 597005 50066398 ~ 50071941 (-)
G8340 NA other downstream 660252 50005132 ~ 50008694 (-)
G8310 NA other downstream 719354 49948861 ~ 49949592 (-)
AMCG00004429 NA other downstream 1243764 49411207 ~ 49425182 (-)
AMCG00004480 LOC107565095,LOC104942062,LOC107576893 other upstream 36286 50710839 ~ 50720925 (-)
G8542 foxred1 other upstream 49314 50723867 ~ 50725353 (-)
AMCG00004481 NA other upstream 56410 50730963 ~ 50738516 (-)
AMCG00004505 NA other upstream 1268140 51942693 ~ 51954532 (-)
G8760 NA other upstream 1390973 52065526 ~ 52065882 (-)

Expression


Co-expression Network