G8601


Basic Information

Item Value
gene id G8601
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 51010818 ~ 51011143 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU10621
tgttagggtatattgtcaaatgtgtagaattgagaacaagggcagtaatgttcagactgtacaatgcactagttagagctcatctggatactgtggacagttctgggctccacacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactgagagactgaggaactgaaccttttcaccctggaacagaggagactacgtggggacttgatccaagtcttcaaaatcatgaaaggcatcgaccacatcaaaccagaggagcttttccagatcagcaggg

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0005201 extracellular matrix structural constituent molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10621 True 326 lncRNA 0.47 1 51010818 51011143

Neighbor

gene id symbol gene type direction distance location
AMCG00004484 fli1,LOC106612965,LOC103145351 coding downstream 132183 50857946 ~ 50878635 (-)
AMCG00004483 kcnj5,LOC107725067,LOC107709561,LOC107558569,LOC106581095 coding downstream 172711 50815722 ~ 50838107 (-)
AMCG00004475 NA coding downstream 350482 50640186 ~ 50660336 (-)
AMCG00004471 NA coding downstream 720079 50289942 ~ 50290739 (-)
AMCG00004470 NA coding downstream 724830 50281745 ~ 50285988 (-)
AMCG00004487 LOC100136491 coding upstream 10195 51021338 ~ 51025994 (-)
AMCG00004492 NA coding upstream 467647 51478790 ~ 51484432 (-)
AMCG00004491 LOC100195238 coding upstream 493325 51504468 ~ 51508828 (-)
AMCG00004493 NA coding upstream 509713 51520856 ~ 51527595 (-)
AMCG00004497 NA coding upstream 806068 51817211 ~ 51832339 (-)
G8552 NA non-coding downstream 254092 50755393 ~ 50756726 (-)
G8550 NA non-coding downstream 258094 50749018 ~ 50752724 (-)
G8541 NA non-coding downstream 288506 50721179 ~ 50722312 (-)
G8524 NA non-coding downstream 316015 50694574 ~ 50694803 (-)
G8505 NA non-coding downstream 328856 50681630 ~ 50681962 (-)
G8707 NA non-coding upstream 835769 51846912 ~ 51880156 (-)
G8758 NA non-coding upstream 1047593 52058736 ~ 52059501 (-)
G8759 NA non-coding upstream 1052261 52063404 ~ 52065450 (-)
G8765 NA non-coding upstream 1079726 52090869 ~ 52091247 (-)
G8769 NA non-coding upstream 1105737 52116880 ~ 52163082 (-)
AMCG00004481 NA other downstream 272302 50730963 ~ 50738516 (-)
G8542 foxred1 other downstream 285465 50723867 ~ 50725353 (-)
AMCG00004480 LOC107565095,LOC104942062,LOC107576893 other downstream 289893 50710839 ~ 50720925 (-)
G8501 NA other downstream 337443 50671066 ~ 50673375 (-)
AMCG00004467 trappc4,LOC106612982,LOC107561742 other downstream 784992 50209983 ~ 50225826 (-)
AMCG00004505 NA other upstream 931550 51942693 ~ 51954532 (-)
G8760 NA other upstream 1054383 52065526 ~ 52065882 (-)
G8761 NA other upstream 1056910 52068053 ~ 52071586 (-)
AMCG00004529 bco2 other upstream 1839340 52850483 ~ 52874108 (-)
AMCG00004533 NA other upstream 1887616 52898759 ~ 52911752 (-)

Expression


Co-expression Network