G8758


Basic Information

Item Value
gene id G8758
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 52058736 ~ 52059501 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU10832
AGAAAGGTTAGGATGTCTTACCAACTATCCCGTGAAAAGGAGGTGATCAGCCTGATCCCAGGTGCCAGCGAGGACCTCATTGTCACTTTGTATCCTTGTCAGCCttcttcacactgaaacaaatatcATCCCGGTACCCTCGACTGGAAACAAAGTATCCCTTTATAACTGGGAGCCGGTTTCCACGTTGGCATCCAGgaactcaataaataaaaaagaatttCGAACGCTCGCTCGACTAAACCGTGAAAATCGTTCGATTGCTTCGTTTTGATACAAAACCCGATTCCTTTGATAAACAGATATatgcacaacacacagacagaaaagaaaGGAGCTCGACTGTGGACGTAAACAATGCCGGCTTTCTCTCTGCGCTTTCAGTTTGATTGTCAAGTGTTTCGGTTTCCAAGCGGTCGTGCGATGACAACGACACCGTGTCAGTTAACATTAAAATCCATAAAAGAAAAGCCGAGCCGAGATGCTCTCCATTTAAAACCCAAAGAGGCGGCGTCGTATCTCGCCGTTTCCTTCtcctctaaaaataaataattgaaaaacaatggcTATGGAGAACAGGCATCAGCTTTCAGCTTGATCAGTCCCATGATCACGGAATGGAAAGTCATCTGAGAGGATTTAAAGTCAGCGCATCCCGATGTTTTCCTCTTGGTCGTGGATCACATGGTTATATTTTTTCGCCATGTTTCCTAGACGTGTCCGTGCAGCCGGCAGGACAATCCCTAGTGTCCCGCACCGCCAGCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10832 True 766 lncRNA 0.46 1 52058736 52059501

Neighbor

gene id symbol gene type direction distance location
AMCG00004502 NA coding downstream 139837 51870043 ~ 51918899 (-)
AMCG00004503 NA coding downstream 190198 51856858 ~ 51868538 (-)
AMCG00004497 NA coding downstream 226397 51817211 ~ 51832339 (-)
AMCG00004493 NA coding downstream 531141 51520856 ~ 51527595 (-)
AMCG00004491 LOC100195238 coding downstream 549908 51504468 ~ 51508828 (-)
AMCG00004517 NA coding upstream 153129 52212630 ~ 52222193 (-)
AMCG00004519 tomm40l,si:dkey-71l1.1,LOC103030645,LOC107691796,LOC107603199,LOC107574698,LOC107745123,LOC107663776 coding upstream 168119 52227620 ~ 52232504 (-)
AMCG00004518 NA coding upstream 177713 52237214 ~ 52240865 (-)
AMCG00004521 grik4,LOC108439963,LOC108277597 coding upstream 195342 52254843 ~ 52296244 (-)
AMCG00004522 NA coding upstream 258130 52317631 ~ 52336606 (-)
G8707 NA non-coding downstream 178580 51846912 ~ 51880156 (-)
G8601 NA non-coding downstream 1047593 51010818 ~ 51011143 (-)
G8552 NA non-coding downstream 1302010 50755393 ~ 50756726 (-)
G8550 NA non-coding downstream 1306012 50749018 ~ 50752724 (-)
G8541 NA non-coding downstream 1336424 50721179 ~ 50722312 (-)
G8759 NA non-coding upstream 3903 52063404 ~ 52065450 (-)
G8765 NA non-coding upstream 31368 52090869 ~ 52091247 (-)
G8769 NA non-coding upstream 57379 52116880 ~ 52163082 (-)
G8776 NA non-coding upstream 108839 52168340 ~ 52168541 (-)
G8795 NA non-coding upstream 143693 52203194 ~ 52203680 (-)
AMCG00004505 NA other downstream 104204 51942693 ~ 51954532 (-)
AMCG00004481 NA other downstream 1320220 50730963 ~ 50738516 (-)
G8542 foxred1 other downstream 1333383 50723867 ~ 50725353 (-)
AMCG00004480 LOC107565095,LOC104942062,LOC107576893 other downstream 1337811 50710839 ~ 50720925 (-)
G8501 NA other downstream 1385361 50671066 ~ 50673375 (-)
G8760 NA other upstream 6025 52065526 ~ 52065882 (-)
G8761 NA other upstream 8552 52068053 ~ 52071586 (-)
AMCG00004529 bco2 other upstream 790982 52850483 ~ 52874108 (-)
AMCG00004533 NA other upstream 839258 52898759 ~ 52911752 (-)
G8937 NA other upstream 887311 52946812 ~ 52951387 (-)

Expression


Co-expression Network