G8759


Basic Information

Item Value
gene id G8759
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 52063404 ~ 52065450 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU10833
gtaaatattgaGCAAGCAGGGCGCTGTACATATTCAAGGTTTTTAAAACTCATCCATGGTGAAGATGCGTGGGAAATGAAGGACGAGGAAAGAAAGGGGGATGTGAACTTACTTTCCACCAAGAAGAAGAAGCACAGGATCCCAGTGACAGCGATGATGATGCCGGGCACAATGAAGGACAACCCCCACGCAGACGACACGAACATCCCTGCGATCAAGGAGCCCAGGATGTTGCCCACCGACGTGTGGGAGTTCCAGATGCCCATGATCAAGCCCCGCCTGTGACGGTCAAGAAGTCAGAATTCTGTCAGCGACGGGCACCAGATTTAGTATCCTAATCCAGACATCCCTACTGGAGACATGCACATCTAGAGGCCAGCCAGCTTTAATGGGGATGACAGGCAACCTCTCATTGCACTCCAGTTTGATCCATTTcagatataagaacataagaaagtgtccaatcgagaggaggccattcgccccatcgtgctcatttggtgtccattaataactaagtgatcccaggatcctatccagtctgtttttgaatgttcccaaattgtctcttcagccacatcgctggggagtttgttcagattgtgacgcctctctgtgtgaagaagtgtctcctgttttctgtcttgaatgccttgaagcccagtttcctcTTGTGTctctgggtgcgtgtgtccctgctgatctggaaaagctcctctggtctaATGTGGACCAGCAACAGATATTGTGCCGATATTGTGTAGACTAGACTGGGGTGCAGTGGAGAGAGAACTCTGGAAAACCACACAGATCTTTCTCTTGCTGCAGGGACCGGCAGCCAGCAGAGTCTAATCGATGTGGAGCGCACATGCAACACCGGCCTGTGGTTTGCGTTCACGTTCGGTGCACGTTGCACAAACCACCCACGTCATCACTGCTGACGCACTGGGGAACACGGCAAGGTCAGATCCGAGGCAAGTTGTGTAATAAGCCTGACTCATGATCGATTCACACACAGGGTGGTAGACCCACAAGACCGAGATGCCACACAGCTGCTTCCTTTGCTACTCACTTCCCCTTTCCGAACCAGTTCCCGACACAGGTCACCACTGCAGGCCAGCCGGTCGTCTGCACCAAGCCGTTCATCATCTGCAGGGAAACGGCAAACGTCACAACAGCGCCATGATGCTGCACCGGTCGCAGCGTCTGTATAACGTTcacgtgcatgtgtgtgtgtgcgtctatACCATATCTTACGGCTGTTAAACCTGGTCACcgaatgcaaaaatgatacagaaacttgACGACACAAAATGAGCATGGAAAGATATCTGctgggaataaaaaaatatatataggaaaataaatgaatggattagAGAAACAAAAGTATACGACttcattgaaaatgttaaaaaggcaatgggtcggacacactgcaagcagcacagatcaaagatggacagaggaaGCTATTGAACGGAATGGAACCAAAAAAACACCTGTGAGACGACCACAAAGATGGGAAGGTGAAATCATGCACCGTGCAGGCGCGACATGGAAAAGCTAAGCCAGCATCGTGCTGCAGGAAAGACAAACGAGTGGGGTAGTTTTGTGAAGGAGCACTGTAACGGGTATGCAGCGGAGAGGAGGCGCGTCCGTTCCACGAGCCGGGACCCTGTCTGCAAACATCTCTGTTCTTTATGATGAGAAAGAGAAGAGATCCATCCGGTCTTGAGATTCTCAGTGGGggttaaaaagacaaaacattttgtttttattcttttctttgtaCCTGGGCAAAGACGTAGAACCAGATGGAGTGGATTTTCCAGTAGAAGCCCAGGCCGAAGAGGGCCGTGAAGAAGCCGCTGAGGACCATCCCAGTGGAGAGGTAGTAGCGCAGGGGCAGTCGCTCTCCAAAAATCCcactggtgagagagagaggccatcACTCTCATTCCACAGACTAGGTCACAGGATTCAATCAGCTTTGGTTTAAATATCCCCAGCCTCCCATTTTGTATTACAACACTGAATTGGAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10833 True 2047 lncRNA 0.49 1 52063404 52065450

Neighbor

gene id symbol gene type direction distance location
AMCG00004502 NA coding downstream 144505 51870043 ~ 51918899 (-)
AMCG00004503 NA coding downstream 194866 51856858 ~ 51868538 (-)
AMCG00004497 NA coding downstream 231065 51817211 ~ 51832339 (-)
AMCG00004493 NA coding downstream 535809 51520856 ~ 51527595 (-)
AMCG00004491 LOC100195238 coding downstream 554576 51504468 ~ 51508828 (-)
AMCG00004517 NA coding upstream 147180 52212630 ~ 52222193 (-)
AMCG00004519 tomm40l,si:dkey-71l1.1,LOC103030645,LOC107691796,LOC107603199,LOC107574698,LOC107745123,LOC107663776 coding upstream 162170 52227620 ~ 52232504 (-)
AMCG00004518 NA coding upstream 171764 52237214 ~ 52240865 (-)
AMCG00004521 grik4,LOC108439963,LOC108277597 coding upstream 189393 52254843 ~ 52296244 (-)
AMCG00004522 NA coding upstream 252181 52317631 ~ 52336606 (-)
G8758 NA non-coding downstream 3903 52058736 ~ 52059501 (-)
G8707 NA non-coding downstream 183248 51846912 ~ 51880156 (-)
G8601 NA non-coding downstream 1052261 51010818 ~ 51011143 (-)
G8552 NA non-coding downstream 1306678 50755393 ~ 50756726 (-)
G8550 NA non-coding downstream 1310680 50749018 ~ 50752724 (-)
G8765 NA non-coding upstream 25419 52090869 ~ 52091247 (-)
G8769 NA non-coding upstream 51430 52116880 ~ 52163082 (-)
G8776 NA non-coding upstream 102890 52168340 ~ 52168541 (-)
G8795 NA non-coding upstream 137744 52203194 ~ 52203680 (-)
G8829 NA non-coding upstream 303789 52369239 ~ 52369463 (-)
AMCG00004505 NA other downstream 108872 51942693 ~ 51954532 (-)
AMCG00004481 NA other downstream 1324888 50730963 ~ 50738516 (-)
G8542 foxred1 other downstream 1338051 50723867 ~ 50725353 (-)
AMCG00004480 LOC107565095,LOC104942062,LOC107576893 other downstream 1342479 50710839 ~ 50720925 (-)
G8501 NA other downstream 1390029 50671066 ~ 50673375 (-)
G8760 NA other upstream 76 52065526 ~ 52065882 (-)
G8761 NA other upstream 2603 52068053 ~ 52071586 (-)
AMCG00004529 bco2 other upstream 785033 52850483 ~ 52874108 (-)
AMCG00004533 NA other upstream 833309 52898759 ~ 52911752 (-)
G8937 NA other upstream 881362 52946812 ~ 52951387 (-)

Expression


Co-expression Network