G907 (kbtbd11)


Basic Information

Item Value
gene id G907
gene name kbtbd11
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 5550745 ~ 5556306 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU1087
ACCAGTCCAAATAACcatgaaaatgagaaaacaaggACCTCTAAACAACAATTTTATTGCAGCACTTAATTTTAACTGAGATACATTATCAAACGGCTTGAAAGCCGTACATTAGAGTGTTAGCTGTTATTAAGTACAATTAGAAAGCTGTTGTCTTTGCAAAGTCAGTATAAACCTCCATTTCAACCTTATAACACAGCAAATCCAACTCCAAAAGCAGtcttttaaatttcaattaagCCAGCCAGCAGTATGCACGGTATGCACAACTTTTGCCACATACTACATCCGCATAGCTGTAATACTGTTTTTCAAACAAGATtttcacacactgaaacacaagtTCCTGTTACATGTTTGCATTAAGCATTCCCAGTTTAGCTGcaagagaaaatattttttatgcaCAACAAGAACATATATTGCTTTTACAAACAGACTcacacaaattaagaaaaacaacaatcataaGGTAAGAGTACATAAGGTTATTTCATTCAATAAGTGCAATCCCGGTTTCTGCGAGTGGATTGGCATACCAAAGCAATGTGatggaaaaaatacagtttgaagCTTTCAAAGTGCTTTTCAGTTATATGAGAGAAACATCAGATATTTTATGAAACCATACCTATGCAAGATACCTCTTCTCTAAATGAAAGGAAACCAGTTTGCATGGGTGACATAGCTTTTTGACAGTATTGGACAGGAgcacaaaaaataatgacattgttttttctctaaTATTGGCAACAGAAATGCAGAATGACAATAAAGCCAAATGCAACTGCAGTGCAATAAAGTAATGCAGAGTAGAGAAACGGGATGACAGTTAGACTCCAAACAGAGGCTCACAACAAAAAGAAGGGAGGAGTGAGGGGTGTAATTGCTTTTTCATGAACTGCTTAGCAGGGTCATAAACTATTTTTAGTTGGTGCTTACCATACttggaaaaaaacactgcatgcaCTACACTCTTTTTCCAACTAACCATAATGAGCAGCTAAAAGACGTGTTTCTTGTAACCAATGAATTAATGCATGATATTCTACAGAGCTGTAAAAAGAATAGGAATGTTATCTCAAAAAAGACCTGTACTGCCAAGTGAAGGACtctattgattgatttacaGACTGATTGAGTTGTTTCAAATTCTGACATTGAAGTGTAGAATATGAGTGTAGGGGGGTGTCCTTCTAAAGCAAAGAATTTcaataacaattaaatcaatatggGCCTCTCTGCAAATGCATACATCTAAAGGTATAGGTTGTGTGGATTGGTGTATTACAAAGAAATTTTAGGGGTGGGTGGATTTGCCAAAATGTAGGAGTTTGACGATACCTTTAATAAAGGACTTTTTAATCCATTAACCATTCATCAAAAAGCATTGCAACACCTTTCCTATATCTAGTAAACTGTGATGGCAGCATATGCCATTAGATTTAATTTCCATCCAGATTGTGAGAAGaatgaaattgattaattaagacACAGTATGAAAATAAGTCACATTCTACTAAAACACGGGCACCTCTTAATCATCTCTACTGAGGACTGAGGCGTGGTGTTTTTCGTCTTGTAAGAATGaatccatgtttttatttatagattaaaTGTCATGCAGCAAAACAGGATTACCAACACATGCCTCAGTTAAACAGCTGGCCTGGTATTTTGCAGCCAACAGTTTCAAATGATCGAgtcacagaaaaatatataattgtttctgACAGCCTGACAAGCCTGAGTTTGTTGCATATTGAGAAATGGTTTAAATCACAACAAATGGAAGGACCTAGGTTTATGGTCATGATTTTGCTCCagtcaaataaaaagaaaaaatgactGTCCTACTAAAGAGTCTTATACAACAACTGATAGCACATGCAAGAGAAAACTACATTGGTATGGAATTTATGGATAATGTAATGAATGGTACCTTgttctctatattgttgtaaaacttaaattatacaaaaatgtaagaaCGTTTACAAAAGAAGCATTGGatccatcatgctcgtttgttAGATAGTAAAGGAATGTTCTGAGGATGACATCCAGGCTTTTTTAATGATCCCAAGGAGACAGCATCAAGACTAGGAATATATGAGATGCAGCTTTTGTTTCGTACAATAAAGGATtcttcaaatataaaatgtataatgatggTTCTTTTTACTTCTGGTGTTGACTACTTTGATTTCTTCTGTATTATTAcataggaatatatatattatgctgcctggaaaacactgttttgcacatttctttaaaataggCAATGCCCTGAACTAACAGTAGTTAAAGAAGTGcataaaaactggaaaacaaattactttaaattaaagtgtAGCATACACGTGTTCCTTATATGAGTTAATAACTGAATTCCGTTTCACTCaggaaattaatttcaaaataatattctgCTATAGGCTTATGActggattttaaaaagtgtgcAAGCCTAAAACCTCATTGACTGTCTATTGCTTTATGCCTGTGAataccatttaaaatcaaacccTTAGCCTGTATGACAATTAGATTTCTGAACTTTgcatgcaaacaaacaacatttgttttcatttaaattacaaatcttACCAAAAATACACATCAGCCAATGTTCTTAATTGAACTCATCAGATCACCCACTTAACTCATTTTAGTCACTCGTTGATATAAATCCATCTTTCAGGAGATGCGCACAATCCCATTTGCACACGACTATTGCGCACTATTTTCTGCCTTCTCGGGGAGGCTCAGTATGAAGGGAAAGAGGACGCCTTTAGCTTCAAAGGGGGCTTTCAACTCCTCTGGACCAAATCTCGCCTCTTCCTCCTCTATGGTGAACTGCAGTGTGTGGGACTTGTTGACACAGTAAATGCAGCTGCCAATGACTGCGCATCTGAAAGGCAACGGGTTGCTCTGTCGCAACGAGGCGCTTTCCTTCCACAGTTTCACGATGGTGTTGTATCTGAACACACTGACACCCTGGTCGCGGTTCACGTCGAACCTGTAAATGAAATTTTTAAAGGCCACCATGTCTGTGGATTTCTTCCTGCTGTTGTTGTAGGGGCATTCCTGCCACTCGTCCCTCTTGGGGTCGTATTTGAGCAGGCGATAGAAGAGGGAGCCCCCAGACACATAAATCTCCCCGTTGCAGGTGGTCGCTTCGTGCGCCACGGCGAAGGCGCCTTTAGGCAGCGGCGCCACTGGGGTCCATCTGTCCATCCGGGGATCGTACTTCTCCACCGTGAACAGACACTCGCCTCCTATCGCATACAGATACCCGTCTACAGACACCAGTTTTAGCTGTGACCTTGGCTGATTCAACGGTCTGACTTCGCTCCAGCTATCAGTGATGGGGTTATAGCAAAACACCTTATCCGAGAGCTTGCCTTTGTCGCCATATCCCTTTATTCCACCTGCAACGAATAGGTAGTTGTACATGGAGCAGATGCCACAGCCCTTTGTGTTGATATCCTCCGGCATGCGAGTGAGCGCTCTCCAGTCCTTCACTGTTTCGTTGTAGTAATATATTAGATGGTTTTCTTCAAAGGAAACTATAGACAGAGGGCTCTGGGGACGGCTATTATCTCGGCTTTGAGGTCTGCTCCCAACACGATCATAAACATCATTGATTTCAGCCACCATTAAGCACTGCTTGCCTTCCATTCTTGTTTTCAGAATCAGATCCCGTTCAGATCCCGTTAACCGCCCATAGACAGCAGGGTCCCTCAATATCTGCAGAAAGTGGTCGCTCATGAACCTGTAAGCCGTCTCTTTCAGTTCGTTTAATCGCTGTTTTTTAGCGATGGTTAAGATGTCATAGCAGTTCTCGGTGCTGATCTGTCCCGACATTGTATCCATTGCTGTCTCAACTGCGCAGGGGATCTGGAGAATTTTCGCGCCGGTAATGACCTCCACCACGTTGTCCTTGGTCACGTCCATTCTGGAGGAATAAATATAATCCACCAAAACCTTTAAGGTCGTATAACTGACGCCTTTCACCTTCAGGATGTCTCTCGACTGCCGTGCCTTGAAATAGTCACTCTTCTCTGCCAAGATGGATTTGTGCGCCCGGATTTTCTTTCCAGCCACTTCAATCACCAAATCCGGCTCTTCCTTAAAACTATACCGATTTCTGACTCCGTTTCCACTCTCCCACCGTCCTTGAGTCGATTCCAGCCCCGAGTTTCCTTGAATTGTGTCAAATCCCCTCTGTGCGGGTCCGGATCCCGCACCGCCCAGATGACCCGGCTCATGTGTTGGCTGCGCTCCCGCAGAGATACAATAAGTGTCAGGCGCAAAggtcccctcctcctcctcctcctccagcccGGAGTTGGCATTATTAATCTGACCCTGACTTTTCACAATTCTGCTCTCGTTAGATAATAGAGAGTCGCTTTCAGTTTCGTCCTTGGTTTCGATGGAGAAGCATAAGGAATGGCTCAGACCGCAGGGCACTTTCGCCCGGGAGCCATTCACCTCGGTGCTTCCATTCCTGCTAATGGGATTGTTCTGGTTTGGACCTGGGTCTTGTGATCGCAACTGAGAAGTCCTTGAAGAAATGTGCATCTTTTGGAAATCGGACTCCTGAAACAAGGACCATGGCTTTGGGTTTGCATTGGCATCACCCGTGCTGGCGCTTCTCGCGTCGTGCTCGTACTGCTCCCTGTCCGAGCTCTGGGGCCCCTTGCCCAGCGGGTCCACTGCAGCGCCCGGGCCCTTGCTGGCCACTCGGGCTCTCTGTCGACAGCAAGCCTGATGCTCCTGAGGAGTTGTCATTTCTGCCAGATTTCCAACAGCCTCCAGTTGCAACACAGCGCTTTTACTTAACCGATCTGCCCCTTGAGAAACAAGAGGTGTGTCAGCATTGGCAGCGTGGAAACTGAACCCTGCCTCCGAAGTGAACTCCACACGGGGGTGGGTGACAGTCGCACCCTGCACTCCTTCATTCATCCTTTCTTTCTCCAGTTTTAATGTCTGAGCTGTTCCTCGGCGGGTAAAGTCGTTATTCTGCAAAATGGGGGTTTGCATTGTCTTTTCGcgtttaaatggaaaatgttacCACACCGAGCTCTATGGTCATCTGGCTTTGGTGTCTTTCTTGGAAGACTCCCTCCCACACACAGTCTCAATAGgcgaattacattttaatgacagtAATCATTTTTGTCCTGGTGTGAAGTTTCCAGGGAGAAACGcctttgaattgttttaaagGTTAACAGTGTGGAaagcattgcattgcatataAAGAGCACTCACACCGCTATTATGTGGAATTAAACGCAAACTGTAACATGGTGAGATggaataattgttgttttgattCTATATTTCAAAAAGCAGAAATCTGATATCCAGATATCGTTTTTCAGATTGTTGTCCTAGGAGGAGGCATGGGTGCACAGCCCCTTCAAGTTCCTAATAAATTGGGTGATGATTCAGTGCAAGAATAATCCAAAAGGATCTTCTTCAGATAGAGCTTTCCTTTGAATCCAGCCTCCCCGTGTCATCTAT

Function

symbol description
kbtbd11 Orthologous to human KBTBD11 (kelch repeat and BTB domain containing 11).

NR:

description
PREDICTED: kelch repeat and BTB domain-containing protein 11

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1087 True 5541 lncRNA 0.40 2 5550745 5556306

Neighbor

gene id symbol gene type direction distance location
AMCG00003487 NA coding upstream 43838 5463759 ~ 5506907 (+)
AMCG00003485 NA coding upstream 148205 5379028 ~ 5402540 (+)
AMCG00003481 NA coding upstream 210898 5335491 ~ 5339847 (+)
AMCG00003478 LOC108428732,LOC107594120,LOC107734000,LOC107552030,LOC106571024,LOC103363535 coding upstream 363472 5175015 ~ 5187273 (+)
AMCG00003475 NA coding upstream 855408 4689484 ~ 4695337 (+)
AMCG00003495 NA coding downstream 195837 5752143 ~ 5753261 (+)
AMCG00003498 NA coding downstream 211052 5767358 ~ 5769937 (+)
AMCG00003497 NA coding downstream 268275 5824581 ~ 5825732 (+)
AMCG00003496 NA coding downstream 358165 5914471 ~ 5915592 (+)
AMCG00003500 NA coding downstream 710595 6266901 ~ 6267507 (+)
G752 NA non-coding upstream 997100 4552898 ~ 4553645 (+)
G742 NA non-coding upstream 1066475 4483890 ~ 4484270 (+)
G690 NA non-coding upstream 1170926 4326653 ~ 4379819 (+)
G684 NA non-coding upstream 1175806 4296559 ~ 4374939 (+)
G646 NA non-coding upstream 1460426 4086896 ~ 4090319 (+)
G908 NA non-coding downstream 1301 5557607 ~ 5558515 (+)
G960 NA non-coding downstream 273153 5829459 ~ 5829745 (+)
G983 NA non-coding downstream 399298 5955604 ~ 5955820 (+)
G990 NA non-coding downstream 429732 5986038 ~ 5986394 (+)
G1146 NA non-coding downstream 1517098 7073404 ~ 7073609 (+)
AMCG00003480 NA other upstream 215993 5303450 ~ 5334752 (+)
AMCG00003469 NA other upstream 1028345 4514031 ~ 4522400 (+)
AMCG00003473 NA other upstream 1095603 4452564 ~ 4455142 (+)
G1012 NA other downstream 931386 6487692 ~ 6494905 (+)
AMCG00003524 rps7,LOC107668222 other downstream 1941734 7498040 ~ 7504015 (+)
AMCG00003534 id2,LOC106566577 other downstream 3092819 8649125 ~ 8652470 (+)
AMCG00003541 asap2,LOC106566627 other downstream 3344150 8900456 ~ 8941751 (+)
AMCG00003544 NA other downstream 3519584 9075890 ~ 9106765 (+)

Expression


Co-expression Network