G8833


Basic Information

Item Value
gene id G8833
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 52553919 ~ 52554373 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU10920
gtttttgaatgttcccaaattgtctcttcagccacatcgctggggagtttgttcagattgtgacgcctctctgtgtgaagaagtgtctcctgttttctgtcttgaatgtcttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttgaatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcagttcctcagtctctcagtaggacattcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgacatctttcttgaagtgtggagcccagaactgtccacagtatccagatgagctctaactagtgcattgtacagtctgaacattactgcccttgttctcaattctacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10920 True 455 lncRNA 0.39 1 52553919 52554373

Neighbor

gene id symbol gene type direction distance location
AMCG00004523 grik4,LOC108439963,LOC107676315,LOC106529682 coding downstream 154748 52353372 ~ 52399171 (-)
AMCG00004522 NA coding downstream 217313 52317631 ~ 52336606 (-)
AMCG00004521 grik4,LOC108439963,LOC108277597 coding downstream 257675 52254843 ~ 52296244 (-)
AMCG00004518 NA coding downstream 313054 52237214 ~ 52240865 (-)
AMCG00004519 tomm40l,si:dkey-71l1.1,LOC103030645,LOC107691796,LOC107603199,LOC107574698,LOC107745123,LOC107663776 coding downstream 321415 52227620 ~ 52232504 (-)
AMCG00004524 NA coding upstream 69033 52623406 ~ 52665227 (-)
AMCG00004525 NA coding upstream 172412 52726785 ~ 52733805 (-)
AMCG00004526 LOC103129659,LOC106941049,LOC104945933,LOC107657232 coding upstream 183765 52738138 ~ 52783362 (-)
AMCG00004528 NA coding upstream 255222 52809595 ~ 52821661 (-)
AMCG00004534 NA coding upstream 372988 52927361 ~ 52931681 (-)
G8829 NA non-coding downstream 184456 52369239 ~ 52369463 (-)
G8795 NA non-coding downstream 350239 52203194 ~ 52203680 (-)
G8776 NA non-coding downstream 385378 52168340 ~ 52168541 (-)
G8769 NA non-coding downstream 390837 52116880 ~ 52163082 (-)
G8765 NA non-coding downstream 462672 52090869 ~ 52091247 (-)
G8981 NA non-coding upstream 547528 53101901 ~ 53104836 (-)
G9002 NA non-coding upstream 593392 53147765 ~ 53147974 (-)
G9048 NA non-coding upstream 726678 53281051 ~ 53284971 (-)
G9074 NA non-coding upstream 939122 53493495 ~ 53493710 (-)
G9141 NA non-coding upstream 1108011 53662384 ~ 53663246 (-)
G8761 NA other downstream 482333 52068053 ~ 52071586 (-)
G8760 NA other downstream 488037 52065526 ~ 52065882 (-)
AMCG00004505 NA other downstream 599387 51942693 ~ 51954532 (-)
AMCG00004481 NA other downstream 1815403 50730963 ~ 50738516 (-)
G8542 foxred1 other downstream 1828566 50723867 ~ 50725353 (-)
AMCG00004529 bco2 other upstream 296110 52850483 ~ 52874108 (-)
AMCG00004533 NA other upstream 344386 52898759 ~ 52911752 (-)
G8937 NA other upstream 392439 52946812 ~ 52951387 (-)
AMCG00004551 NA other upstream 624649 53179022 ~ 53189393 (-)
AMCG00004567 NA other upstream 1132043 53686416 ~ 53863369 (-)

Expression


Co-expression Network