G9146


Basic Information

Item Value
gene id G9146
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 53697376 ~ 53700585 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU11330
CTTTTGGACACAGCAGCCAGTTGTGGCTGATGGTCTTTTGCATCCCTTCAGGCTACAGATGAGAGAACAGACTCCATTATAACTGTGCAGTATTTCAGAAAGAACAGTATCTAGAAGATACCTTTAAACAGGGGTTAAATTGTACCAGAGTTCACTGTAGCCAGGCAGCCTCCTTGAACTGAGCACAAGCACAATTCTTTCCCTCGCTGTGAGACATGCTGATGGTAGGCTGCATTGAGCAAAGTAACGTGACTGATTGTAAAACACTAAGCTGGTGATGATATTAACTAGCACATTTGTCAAAATAAGTCACTAACTTTTAAGTCACATTGAACAATTTAATACTTTAACCTGGCTAAGGAGAATGACAGAAGTTAGCTACTGTAACGTTAGCTTGTGTGAGTAAGCAGCATCAAGTGCTGTGGTAAATTAGCTAGTCTACCACAACAACAGCTTACTGTTTCttcagaaaatgtgcaaattTAGAAAAAGTTGTCTTCTTACTTGCTCTGGTGTGAAGCAGTAGCGTCATGGGAGAAAGGCAGCAAGAGGAGATGGCTGACAGATTATTTCTAATTACAGAGATATCTTGCTAGTTTAAGTCGTTAGCTAATACaaatatagttaggtccataaatatttggacagtgacacaatcaatatgtgctttaagtgtagactttcatctttaatttgagggtagttacatccaaattttTATATTtgggtccccccaattttaggggctcaaaagtaattggacaaacaaacattatCATGTCAATTAaattgagtttcaatacttggttgcaaatcctttgcagtcaatgactgcctgaagtctggaacccatagatataaccagatgctgggtttcttccctggtgatgctctgccaggcctgtactgcagctgtctttagttcctgcttgttcttggggcattttgcctccagcaagtgaaatgcatgctcaattggattcagatCAGGTGATTAACTTGCAGAACATTCCAATTCTTCgtcttaaaaaagtattgggttgctttcacagtatgctttggatcattgtccatctgcactgtgcaGCATCGTCCAAtgtgttttgaagcatttggctgaatctgagcagataatatagccctaaacacttcagaattcatcctgctgcttttttcTCTTCAATAAATTGCTCTTCattaaatacaagggaaccagttgaATTCCTAGCGTTATGATACTAAACCCACTatctaaatgaaaatatttgatgtGAATACTGcaattacataaataacagTGGCTGGATATAACTAAGTTCGAAAACGtcataaaaaaaactcaattacACTGTCATGTCAATAGGCATTGAAccagattaaatgtaaaaagattatttagaaaatatacgGTTACACTGATAAAATTGCGTGGACTACTCTGCGTTACTctgcattattgtttatttatccaCGATCTTTACAGCAAAAGTGTTGGGGGATGTATTGgactataaaacaaaacaaatgtttcgaCAGACATTTGCTGTTTGGAATTTTTTGCtcaatgcacagaagacccTCAAGctgaatgtaataaatataatagaaatgtaaaacaaaacaaatgtttagtaGGATTTTCATTTAAATCGATACACTAGTGGTTAACATGATGTCATcgataaattatgcaaatttgcACCAACGAACCTTCGAACCTTTGTTCAGTAATGTGTTGCAAATCTTCAAAGGTAAAAATGTAACCTTCAGGACAGCCCTACTTTTGAATGATTTCAGTAGTGAACAGGACACGATGGTTATGTACTGATTTGTATCCAGGTGTGAGCTTCAGCAATTGAACATCAGTGCAGggagtatatatttttcctatttattaAATTCCGAACAAGCATATTAAGACCAGCTGGAATCTGGATCTTAGATGTAACCCAGGCTCTTTGGGGCCTGCAAGTGTAATGGGGGTGAGGTTATCAACAGGGACACCCGAGCAACAGGAATAAATGTTGATCACAAGGTATCAATATCTGAAGGGTCTTTGCTGAAGAAAGTAGTAGACAGGATCCAAGCAAACTGCAGTTCCTCACCTCTACCAGCAGAGGGCGAATGACAGTGTCGATGTAGCCTCGTTCAGGCACAGTCACCAGCTCATTGTCACAGATGGTCTCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11330 True 2188 lncRNA 0.39 2 53697376 53700585

Neighbor

gene id symbol gene type direction distance location
AMCG00004560 NA coding downstream 69494 53618422 ~ 53627882 (-)
AMCG00004562 usf1,LOC107657261,LOC107601709 coding downstream 86107 53607807 ~ 53611269 (-)
AMCG00004561 NA coding downstream 91960 53587275 ~ 53605416 (-)
AMCG00004558 LOC102781260 coding downstream 111164 53573530 ~ 53586212 (-)
AMCG00004559 NA coding downstream 163539 53526868 ~ 53533837 (-)
AMCG00004569 tecta coding upstream 177690 53878275 ~ 53905023 (-)
AMCG00004572 NA coding upstream 209792 53910377 ~ 53928613 (-)
AMCG00004571 LOC105907815,LOC100708948,LOC105920897,LOC103369551,LOC102197023 coding upstream 235159 53935744 ~ 53949364 (-)
AMCG00004573 NA coding upstream 263400 53963985 ~ 53965707 (-)
AMCG00004570 NA coding upstream 279160 53979745 ~ 53988395 (-)
G9145 NA non-coding downstream 1869 53694204 ~ 53695507 (-)
G9141 NA non-coding downstream 34130 53662384 ~ 53663246 (-)
G9074 NA non-coding downstream 203666 53493495 ~ 53493710 (-)
G9048 NA non-coding downstream 412405 53281051 ~ 53284971 (-)
G9002 NA non-coding downstream 549402 53147765 ~ 53147974 (-)
G9149 NA non-coding upstream 20657 53721242 ~ 53722122 (-)
G9153 NA non-coding upstream 93493 53794078 ~ 53829780 (-)
G9161 NA non-coding upstream 164366 53864951 ~ 53865675 (-)
G9217 NA non-coding upstream 385990 54086575 ~ 54087038 (-)
G9261 NA non-coding upstream 504968 54205553 ~ 54206013 (-)
AMCG00004551 NA other downstream 507983 53179022 ~ 53189393 (-)
G8937 NA other downstream 745989 52946812 ~ 52951387 (-)
AMCG00004533 NA other downstream 785624 52898759 ~ 52911752 (-)
AMCG00004529 bco2 other downstream 823268 52850483 ~ 52874108 (-)
G8761 NA other downstream 1625790 52068053 ~ 52071586 (-)
AMCG00004575 NA other upstream 332049 54032634 ~ 54043428 (-)
AMCG00004590 LOC106612637 other upstream 655875 54356460 ~ 54373627 (-)
AMCG00004598 NA other upstream 741186 54441771 ~ 54450341 (-)
G9414 NA other upstream 876055 54576640 ~ 54620055 (-)
AMCG00004618 dscaml1,LOC107592669,LOC107699174,LOC107728164,LOC107699210,LOC107566081 other upstream 1214999 54915584 ~ 54919938 (-)

Expression


Co-expression Network