Gene
RNA
| Item | Value |
|---|---|
| gene id | G9149 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 53721242 ~ 53722122 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: probable helicase with zinc finger domain isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU11333 | True | 238 | lncRNA | 0.42 | 3 | 53721242 | 53722122 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004560 | NA | coding | downstream | 93360 | 53618422 ~ 53627882 (-) |
| AMCG00004562 | usf1,LOC107657261,LOC107601709 | coding | downstream | 109973 | 53607807 ~ 53611269 (-) |
| AMCG00004561 | NA | coding | downstream | 115826 | 53587275 ~ 53605416 (-) |
| AMCG00004558 | LOC102781260 | coding | downstream | 135030 | 53573530 ~ 53586212 (-) |
| AMCG00004559 | NA | coding | downstream | 187405 | 53526868 ~ 53533837 (-) |
| AMCG00004569 | tecta | coding | upstream | 156153 | 53878275 ~ 53905023 (-) |
| AMCG00004572 | NA | coding | upstream | 188255 | 53910377 ~ 53928613 (-) |
| AMCG00004571 | LOC105907815,LOC100708948,LOC105920897,LOC103369551,LOC102197023 | coding | upstream | 213622 | 53935744 ~ 53949364 (-) |
| AMCG00004573 | NA | coding | upstream | 241863 | 53963985 ~ 53965707 (-) |
| AMCG00004570 | NA | coding | upstream | 257623 | 53979745 ~ 53988395 (-) |
| G9146 | NA | non-coding | downstream | 20657 | 53697376 ~ 53700585 (-) |
| G9145 | NA | non-coding | downstream | 25735 | 53694204 ~ 53695507 (-) |
| G9141 | NA | non-coding | downstream | 57996 | 53662384 ~ 53663246 (-) |
| G9074 | NA | non-coding | downstream | 227532 | 53493495 ~ 53493710 (-) |
| G9048 | NA | non-coding | downstream | 436271 | 53281051 ~ 53284971 (-) |
| G9153 | NA | non-coding | upstream | 71956 | 53794078 ~ 53829780 (-) |
| G9161 | NA | non-coding | upstream | 142829 | 53864951 ~ 53865675 (-) |
| G9217 | NA | non-coding | upstream | 364453 | 54086575 ~ 54087038 (-) |
| G9261 | NA | non-coding | upstream | 483431 | 54205553 ~ 54206013 (-) |
| G9273 | NA | non-coding | upstream | 536441 | 54258563 ~ 54273287 (-) |
| AMCG00004551 | NA | other | downstream | 531849 | 53179022 ~ 53189393 (-) |
| G8937 | NA | other | downstream | 769855 | 52946812 ~ 52951387 (-) |
| AMCG00004533 | NA | other | downstream | 809490 | 52898759 ~ 52911752 (-) |
| AMCG00004529 | bco2 | other | downstream | 847134 | 52850483 ~ 52874108 (-) |
| G8761 | NA | other | downstream | 1649656 | 52068053 ~ 52071586 (-) |
| AMCG00004575 | NA | other | upstream | 310512 | 54032634 ~ 54043428 (-) |
| AMCG00004590 | LOC106612637 | other | upstream | 634338 | 54356460 ~ 54373627 (-) |
| AMCG00004598 | NA | other | upstream | 719649 | 54441771 ~ 54450341 (-) |
| G9414 | NA | other | upstream | 854518 | 54576640 ~ 54620055 (-) |
| AMCG00004618 | dscaml1,LOC107592669,LOC107699174,LOC107728164,LOC107699210,LOC107566081 | other | upstream | 1193462 | 54915584 ~ 54919938 (-) |
